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Zinc in PDB 4qoh: Crystal Structure of Fad Quinone Reductase 2 in Complex with Resveratrol at 1.6A

Enzymatic activity of Crystal Structure of Fad Quinone Reductase 2 in Complex with Resveratrol at 1.6A

All present enzymatic activity of Crystal Structure of Fad Quinone Reductase 2 in Complex with Resveratrol at 1.6A:
1.10.99.2;

Protein crystallography data

The structure of Crystal Structure of Fad Quinone Reductase 2 in Complex with Resveratrol at 1.6A, PDB code: 4qoh was solved by J.Serriere, J.A.Boutin, T.Isabet, M.Antoine, G.Ferry, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 46.68 / 1.60
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 56.690, 82.270, 106.130, 90.00, 90.00, 90.00
R / Rfree (%) 20.2 / 23.8

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of Fad Quinone Reductase 2 in Complex with Resveratrol at 1.6A (pdb code 4qoh). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Crystal Structure of Fad Quinone Reductase 2 in Complex with Resveratrol at 1.6A, PDB code: 4qoh:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 4qoh

Go back to Zinc Binding Sites List in 4qoh
Zinc binding site 1 out of 2 in the Crystal Structure of Fad Quinone Reductase 2 in Complex with Resveratrol at 1.6A


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of Fad Quinone Reductase 2 in Complex with Resveratrol at 1.6A within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn303

b:28.9
occ:1.00
ND1 A:HIS177 2.1 36.6 1.0
O A:CYS222 2.1 28.2 1.0
SG A:CYS222 2.2 26.8 1.0
ND1 A:HIS173 2.2 29.4 1.0
CB A:CYS222 2.9 26.4 1.0
C A:CYS222 2.9 27.1 1.0
CG A:HIS177 3.0 28.7 1.0
CE1 A:HIS177 3.1 32.9 1.0
CG A:HIS173 3.1 30.0 1.0
CE1 A:HIS173 3.1 31.0 1.0
CB A:HIS177 3.2 21.6 1.0
CB A:HIS173 3.4 26.7 1.0
CA A:CYS222 3.4 26.4 1.0
CA A:HIS173 3.5 25.7 1.0
N A:THR223 3.9 31.8 1.0
CD2 A:HIS177 4.1 30.7 1.0
NE2 A:HIS177 4.2 29.5 1.0
NE2 A:HIS173 4.2 30.4 1.0
CD2 A:HIS173 4.2 30.2 1.0
N A:HIS173 4.4 22.9 1.0
CA A:THR223 4.5 30.9 1.0
C A:HIS173 4.5 22.7 1.0
N A:CYS222 4.6 26.7 1.0
O A:GLN172 4.6 25.8 1.0
O A:HIS173 4.6 22.8 1.0
CA A:HIS177 4.7 20.4 1.0
C A:GLN172 4.8 23.2 1.0
CE1 A:HIS227 4.8 27.3 1.0
CZ3 A:TRP169 5.0 26.0 1.0

Zinc binding site 2 out of 2 in 4qoh

Go back to Zinc Binding Sites List in 4qoh
Zinc binding site 2 out of 2 in the Crystal Structure of Fad Quinone Reductase 2 in Complex with Resveratrol at 1.6A


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Crystal Structure of Fad Quinone Reductase 2 in Complex with Resveratrol at 1.6A within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Zn304

b:28.3
occ:1.00
ND1 B:HIS177 1.9 24.4 1.0
ND1 B:HIS173 2.1 29.3 1.0
O B:CYS222 2.2 25.1 1.0
SG B:CYS222 2.2 25.3 1.0
CB B:CYS222 2.8 29.6 1.0
CE1 B:HIS177 2.9 32.0 1.0
CG B:HIS177 2.9 25.2 1.0
C B:CYS222 2.9 28.0 1.0
CE1 B:HIS173 3.0 27.5 1.0
CG B:HIS173 3.1 27.5 1.0
CB B:HIS177 3.3 21.6 1.0
CA B:CYS222 3.4 27.3 1.0
CB B:HIS173 3.4 25.0 1.0
CA B:HIS173 3.6 22.5 1.0
NE2 B:HIS177 4.0 25.9 1.0
CD2 B:HIS177 4.0 26.4 1.0
N B:THR223 4.0 29.4 1.0
NE2 B:HIS173 4.1 27.6 1.0
CD2 B:HIS173 4.2 26.7 1.0
N B:HIS173 4.5 19.7 1.0
N B:CYS222 4.6 28.8 1.0
C B:HIS173 4.6 21.7 1.0
CA B:THR223 4.6 31.0 1.0
O B:HIS173 4.6 21.0 1.0
O B:GLN172 4.7 21.6 1.0
CA B:HIS177 4.8 22.1 1.0
CE1 B:HIS227 4.9 32.5 1.0
CZ3 B:TRP169 4.9 26.7 1.0
C B:GLN172 4.9 18.8 1.0
CE1 B:TYR132 5.0 24.9 1.0

Reference:

J.Serriere, J.A.Boutin, T.Isabet, M.Antoine, G.Ferry. Crystal Structure of Fad Quinone Reductase 2 in Complex with Resveratrol at 1.6A To Be Published.
Page generated: Sun Oct 27 06:41:40 2024

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