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Zinc in PDB 4nin: Dsvisls Segment 101-107 From Human Superoxide Dismutase

Protein crystallography data

The structure of Dsvisls Segment 101-107 From Human Superoxide Dismutase, PDB code: 4nin was solved by S.A.Sievers, M.R.Sawaya, D.Eisenberg, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 22.67 / 1.40
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 4.805, 45.337, 11.300, 90.00, 100.52, 90.00
R / Rfree (%) 18.7 / 22.8

Zinc Binding Sites:

The binding sites of Zinc atom in the Dsvisls Segment 101-107 From Human Superoxide Dismutase (pdb code 4nin). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Dsvisls Segment 101-107 From Human Superoxide Dismutase, PDB code: 4nin:

Zinc binding site 1 out of 1 in 4nin

Go back to Zinc Binding Sites List in 4nin
Zinc binding site 1 out of 1 in the Dsvisls Segment 101-107 From Human Superoxide Dismutase


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Dsvisls Segment 101-107 From Human Superoxide Dismutase within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn101

b:15.5
occ:0.55
OD1 A:ASP1 2.0 23.4 1.0
O A:HOH202 2.1 22.5 1.0
O A:HOH201 2.2 22.7 1.0
O A:HOH203 2.2 23.8 1.0
N A:ASP1 2.2 22.5 1.0
CG A:ASP1 2.8 23.3 1.0
CA A:ASP1 3.1 21.4 1.0
CB A:ASP1 3.2 20.7 1.0
OD2 A:ASP1 3.9 21.4 1.0
C A:ASP1 4.5 21.4 1.0
O A:ASP1 4.9 21.0 1.0

Reference:

M.I.Ivanova, S.A.Sievers, E.L.Guenther, L.M.Johnson, D.D.Winkler, A.Galaleldeen, M.R.Sawaya, P.J.Hart, D.S.Eisenberg. Aggregation-Triggering Segments of SOD1 Fibril Formation Support A Common Pathway For Familial and Sporadic Als. Proc.Natl.Acad.Sci.Usa V. 111 197 2014.
ISSN: ISSN 0027-8424
PubMed: 24344300
DOI: 10.1073/PNAS.1320786110
Page generated: Sun Oct 27 03:11:58 2024

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