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Zinc in PDB 4kn4: X-Ray Crystal Structure of the Escherichia Coli Rna Polymerase in Complex with Benzoxazinorifamycin-2B
Enzymatic activity of X-Ray Crystal Structure of the Escherichia Coli Rna Polymerase in Complex with Benzoxazinorifamycin-2B
All present enzymatic activity of X-Ray Crystal Structure of the Escherichia Coli Rna Polymerase in Complex with Benzoxazinorifamycin-2B:
2.7.7.6;
2.7.7.6;
Protein crystallography data
The structure of X-Ray Crystal Structure of the Escherichia Coli Rna Polymerase in Complex with Benzoxazinorifamycin-2B, PDB code: 4kn4
was solved by
K.S.Murakami,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 29.77 / 3.96 |
| Space group | P 21 21 21 |
| Cell size a, b, c (Å), α, β, γ (°) | 184.675, 203.975, 307.910, 90.00, 90.00, 90.00 |
| R / Rfree (%) | 25.1 / 31.5 |
Other elements in 4kn4:
The structure of X-Ray Crystal Structure of the Escherichia Coli Rna Polymerase in Complex with Benzoxazinorifamycin-2B also contains other interesting chemical elements:
| Magnesium | (Mg) | 2 atoms |
Zinc Binding Sites:
The binding sites of Zinc atom in the X-Ray Crystal Structure of the Escherichia Coli Rna Polymerase in Complex with Benzoxazinorifamycin-2B
(pdb code 4kn4). This binding sites where shown within
5.0 Angstroms radius around Zinc atom.
In total 4 binding sites of Zinc where determined in the X-Ray Crystal Structure of the Escherichia Coli Rna Polymerase in Complex with Benzoxazinorifamycin-2B, PDB code: 4kn4:
Jump to Zinc binding site number: 1; 2; 3; 4;
In total 4 binding sites of Zinc where determined in the X-Ray Crystal Structure of the Escherichia Coli Rna Polymerase in Complex with Benzoxazinorifamycin-2B, PDB code: 4kn4:
Jump to Zinc binding site number: 1; 2; 3; 4;
Zinc binding site 1 out of 4 in 4kn4
Go back to
Zinc Binding Sites List in 4kn4
Zinc binding site 1 out
of 4 in the X-Ray Crystal Structure of the Escherichia Coli Rna Polymerase in Complex with Benzoxazinorifamycin-2B
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Zinc with other atoms in the Zn binding
site number 1 of X-Ray Crystal Structure of the Escherichia Coli Rna Polymerase in Complex with Benzoxazinorifamycin-2B within 5.0Å range:
|
Zinc binding site 2 out of 4 in 4kn4
Go back to
Zinc Binding Sites List in 4kn4
Zinc binding site 2 out
of 4 in the X-Ray Crystal Structure of the Escherichia Coli Rna Polymerase in Complex with Benzoxazinorifamycin-2B
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Zinc with other atoms in the Zn binding
site number 2 of X-Ray Crystal Structure of the Escherichia Coli Rna Polymerase in Complex with Benzoxazinorifamycin-2B within 5.0Å range:
|
Zinc binding site 3 out of 4 in 4kn4
Go back to
Zinc Binding Sites List in 4kn4
Zinc binding site 3 out
of 4 in the X-Ray Crystal Structure of the Escherichia Coli Rna Polymerase in Complex with Benzoxazinorifamycin-2B
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Zinc with other atoms in the Zn binding
site number 3 of X-Ray Crystal Structure of the Escherichia Coli Rna Polymerase in Complex with Benzoxazinorifamycin-2B within 5.0Å range:
|
Zinc binding site 4 out of 4 in 4kn4
Go back to
Zinc Binding Sites List in 4kn4
Zinc binding site 4 out
of 4 in the X-Ray Crystal Structure of the Escherichia Coli Rna Polymerase in Complex with Benzoxazinorifamycin-2B
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Zinc with other atoms in the Zn binding
site number 4 of X-Ray Crystal Structure of the Escherichia Coli Rna Polymerase in Complex with Benzoxazinorifamycin-2B within 5.0Å range:
|
Reference:
V.Molodtsov,
I.N.Nawarathne,
N.T.Scharf,
P.D.Kirchhoff,
H.D.Showalter,
G.A.Garcia,
K.S.Murakami.
X-Ray Crystal Structures of the Escherichia Coli Rna Polymerase in Complex with Benzoxazinorifamycins. J.Med.Chem. V. 56 4758 2013.
ISSN: ISSN 0022-2623
PubMed: 23679862
DOI: 10.1021/JM4004889
Page generated: Sun Oct 27 01:17:15 2024
ISSN: ISSN 0022-2623
PubMed: 23679862
DOI: 10.1021/JM4004889
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