Zinc in PDB 4gnx: Structure of U. Maydis Replication Protein A Bound to Ssdna

The structure of Structure of U. Maydis Replication Protein A Bound to Ssdna, PDB code: 4gnx was solved by N.P.Pavletich, J.Fan, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	20.00 / 2.80
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	78.100, 91.400, 114.600, 90.00, 97.80, 90.00
R / Rfree (%)	21.9 / 27.8

The binding sites of Zinc atom in the Structure of U. Maydis Replication Protein A Bound to Ssdna (pdb code 4gnx). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Structure of U. Maydis Replication Protein A Bound to Ssdna, PDB code: 4gnx:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the Structure of U. Maydis Replication Protein A Bound to Ssdna


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Structure of U. Maydis Replication Protein A Bound to Ssdna within 5.0Å range: probe atom residue distance (Å) B Occ C:Zn701 b:72.5 occ:1.00 SG C:CYS490 2.3 66.8 1.0 SG C:CYS512 2.3 86.8 1.0 SG C:CYS495 2.3 73.7 1.0 SG C:CYS509 2.4 65.3 1.0 CB C:CYS490 3.2 61.6 1.0 CB C:CYS495 3.4 78.4 1.0 CB C:CYS512 3.4 91.7 1.0 CB C:CYS509 3.5 63.5 1.0 N C:CYS512 3.8 89.0 1.0 CB C:SER492 4.1 83.9 1.0 CA C:CYS512 4.2 93.8 1.0 OG C:SER492 4.2 84.6 1.0 CD C:LYS511 4.3 88.0 1.0 CB C:LYS511 4.5 84.4 1.0 CA C:CYS490 4.6 58.1 1.0 CA C:CYS495 4.8 80.1 1.0 C C:LYS511 4.9 92.0 1.0 CB C:LYS497 4.9 70.4 1.0 CA C:CYS509 4.9 61.9 1.0

Zinc binding site 2 out of 2 in the Structure of U. Maydis Replication Protein A Bound to Ssdna


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Structure of U. Maydis Replication Protein A Bound to Ssdna within 5.0Å range: probe atom residue distance (Å) B Occ Z:Zn701 b:68.4 occ:1.00 SG Z:CYS490 2.3 62.0 1.0 SG Z:CYS509 2.3 68.1 1.0 SG Z:CYS495 2.3 72.5 1.0 SG Z:CYS512 2.4 78.0 1.0 CB Z:CYS490 3.1 58.3 1.0 CB Z:CYS509 3.3 65.9 1.0 CB Z:CYS495 3.5 75.0 1.0 CB Z:CYS512 3.5 85.1 1.0 N Z:CYS512 4.0 85.4 1.0 CA Z:CYS512 4.2 87.5 1.0 O Z:CYS512 4.3 81.6 1.0 CB Z:LYS497 4.4 71.5 1.0 CA Z:CYS490 4.5 54.4 1.0 CB Z:SER492 4.7 76.1 1.0 C Z:CYS512 4.7 85.9 1.0 CA Z:CYS495 4.8 74.8 1.0 CD Z:LYS511 4.8 83.4 1.0 CA Z:CYS509 4.8 65.5 1.0 CB Z:LYS511 4.9 83.6 1.0 C Z:CYS495 4.9 70.4 1.0 OG Z:SER492 4.9 78.0 1.0

N.P.Pavletich, J.Fan. Structure of To Be Published.