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Zinc in PDB 4bu5: Crystal Structure of Human Tankyrase 2 in Complex with 2-(4- Hydroxyphenyl)-3,4-Dihydroquinazolin-4-One

Enzymatic activity of Crystal Structure of Human Tankyrase 2 in Complex with 2-(4- Hydroxyphenyl)-3,4-Dihydroquinazolin-4-One

All present enzymatic activity of Crystal Structure of Human Tankyrase 2 in Complex with 2-(4- Hydroxyphenyl)-3,4-Dihydroquinazolin-4-One:
2.4.2.30;

Protein crystallography data

The structure of Crystal Structure of Human Tankyrase 2 in Complex with 2-(4- Hydroxyphenyl)-3,4-Dihydroquinazolin-4-One, PDB code: 4bu5 was solved by T.Haikarainen, M.Narwal, L.Lehtio, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.11 / 1.80
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 91.130, 98.210, 118.770, 90.00, 90.00, 90.00
R / Rfree (%) 16.663 / 19.268

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of Human Tankyrase 2 in Complex with 2-(4- Hydroxyphenyl)-3,4-Dihydroquinazolin-4-One (pdb code 4bu5). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Crystal Structure of Human Tankyrase 2 in Complex with 2-(4- Hydroxyphenyl)-3,4-Dihydroquinazolin-4-One, PDB code: 4bu5:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 4bu5

Go back to Zinc Binding Sites List in 4bu5
Zinc binding site 1 out of 2 in the Crystal Structure of Human Tankyrase 2 in Complex with 2-(4- Hydroxyphenyl)-3,4-Dihydroquinazolin-4-One


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of Human Tankyrase 2 in Complex with 2-(4- Hydroxyphenyl)-3,4-Dihydroquinazolin-4-One within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn2163

b:20.1
occ:1.00
ND1 A:HIS1084 2.1 22.1 1.0
SG A:CYS1081 2.2 20.5 1.0
SG A:CYS1089 2.3 18.9 1.0
SG A:CYS1092 2.3 20.3 1.0
CE1 A:HIS1084 3.0 23.5 1.0
CG A:HIS1084 3.2 23.8 1.0
CB A:CYS1081 3.2 21.6 1.0
CB A:CYS1092 3.2 20.0 1.0
CB A:CYS1089 3.2 18.2 1.0
CB A:HIS1084 3.6 21.6 1.0
N A:HIS1084 3.9 22.3 1.0
N A:CYS1092 4.0 18.3 1.0
O A:HOH3191 4.1 30.1 1.0
NE2 A:HIS1084 4.2 24.6 1.0
CA A:CYS1092 4.2 19.0 1.0
CD2 A:HIS1084 4.3 22.0 1.0
CA A:HIS1084 4.3 22.1 1.0
O A:HOH3190 4.3 27.8 1.0
CB A:VAL1083 4.4 25.4 1.0
CA A:CYS1089 4.6 17.2 1.0
CA A:CYS1081 4.7 20.5 1.0
C A:VAL1083 4.8 26.1 1.0
CB A:ILE1091 4.8 20.0 1.0
O A:HOH3181 4.9 21.9 1.0
CG1 A:VAL1083 4.9 26.6 1.0
N A:VAL1083 4.9 24.7 1.0
CA A:VAL1083 5.0 25.3 1.0

Zinc binding site 2 out of 2 in 4bu5

Go back to Zinc Binding Sites List in 4bu5
Zinc binding site 2 out of 2 in the Crystal Structure of Human Tankyrase 2 in Complex with 2-(4- Hydroxyphenyl)-3,4-Dihydroquinazolin-4-One


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Crystal Structure of Human Tankyrase 2 in Complex with 2-(4- Hydroxyphenyl)-3,4-Dihydroquinazolin-4-One within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Zn2163

b:16.1
occ:1.00
ND1 B:HIS1084 2.1 17.8 1.0
SG B:CYS1089 2.3 15.9 1.0
SG B:CYS1081 2.3 15.8 1.0
SG B:CYS1092 2.3 18.9 1.0
CE1 B:HIS1084 3.0 19.4 1.0
CG B:HIS1084 3.1 20.0 1.0
CB B:CYS1092 3.2 17.9 1.0
CB B:CYS1081 3.2 15.4 1.0
CB B:CYS1089 3.3 14.7 1.0
CB B:HIS1084 3.4 18.6 1.0
N B:HIS1084 3.9 18.3 1.0
N B:CYS1092 4.0 15.7 1.0
NE2 B:HIS1084 4.2 19.1 1.0
O B:HOH3178 4.2 22.4 1.0
CA B:CYS1092 4.2 16.4 1.0
CD2 B:HIS1084 4.2 20.2 1.0
O B:HOH3167 4.3 24.3 1.0
CA B:HIS1084 4.3 17.4 1.0
CB B:VAL1083 4.4 20.0 1.0
CA B:CYS1089 4.6 14.3 1.0
CA B:CYS1081 4.7 16.0 1.0
CB B:ILE1091 4.8 17.8 1.0
C B:VAL1083 4.8 20.2 1.0
N B:VAL1083 4.9 19.0 1.0
CG1 B:VAL1083 4.9 20.4 1.0
O B:HOH3157 4.9 15.8 1.0
CA B:VAL1083 4.9 19.7 1.0

Reference:

T.Haikarainen, J.Koivunen, M.Narwal, H.Venkannagari, E.Obaji, P.Joensuu, T.Pihlajaniemi, L.Lehtio. Para-Substituted 2-Phenyl-3,4-Dihydroquinazolin-4-Ones As Potent and Selective Tankyrase Inhibitors. Chemmedchem V. 8 1978 2013.
ISSN: ISSN 1860-7179
PubMed: 24130191
DOI: 10.1002/CMDC.201300337
Page generated: Sat Oct 26 19:59:50 2024

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