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Zinc in PDB 4bu3: Crystal Structure of Human Tankyrase 2 in Complex with 2-Phenyl-3,4-Dihydroquinazolin-4-One

Enzymatic activity of Crystal Structure of Human Tankyrase 2 in Complex with 2-Phenyl-3,4-Dihydroquinazolin-4-One

All present enzymatic activity of Crystal Structure of Human Tankyrase 2 in Complex with 2-Phenyl-3,4-Dihydroquinazolin-4-One:
2.4.2.30;

Protein crystallography data

The structure of Crystal Structure of Human Tankyrase 2 in Complex with 2-Phenyl-3,4-Dihydroquinazolin-4-One, PDB code: 4bu3 was solved by T.Haikarainen, M.Narwal, L.Lehtio, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.70 / 2.15
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 91.680, 97.690, 118.090, 90.00, 90.00, 90.00
R / Rfree (%) 16.635 / 21.701

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of Human Tankyrase 2 in Complex with 2-Phenyl-3,4-Dihydroquinazolin-4-One (pdb code 4bu3). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Crystal Structure of Human Tankyrase 2 in Complex with 2-Phenyl-3,4-Dihydroquinazolin-4-One, PDB code: 4bu3:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 4bu3

Go back to Zinc Binding Sites List in 4bu3
Zinc binding site 1 out of 2 in the Crystal Structure of Human Tankyrase 2 in Complex with 2-Phenyl-3,4-Dihydroquinazolin-4-One


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of Human Tankyrase 2 in Complex with 2-Phenyl-3,4-Dihydroquinazolin-4-One within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn2162

b:29.5
occ:1.00
SG A:CYS1081 2.2 25.4 1.0
SG A:CYS1089 2.3 23.1 1.0
SG A:CYS1092 2.4 27.3 1.0
ND1 A:HIS1084 2.5 31.2 1.0
CB A:CYS1089 3.1 22.6 1.0
CB A:CYS1081 3.2 28.1 1.0
CG A:HIS1084 3.3 32.3 1.0
CB A:CYS1092 3.3 26.6 1.0
CE1 A:HIS1084 3.4 32.4 1.0
CB A:HIS1084 3.5 30.9 1.0
N A:HIS1084 3.9 33.1 1.0
N A:CYS1092 4.0 25.5 1.0
O A:HOH2120 4.1 38.0 1.0
CA A:CYS1092 4.2 27.0 1.0
CA A:HIS1084 4.3 31.7 1.0
CD2 A:HIS1084 4.4 32.6 1.0
NE2 A:HIS1084 4.4 33.5 1.0
O A:HOH2116 4.5 40.3 1.0
CA A:CYS1089 4.6 22.9 1.0
CB A:VAL1083 4.6 36.1 1.0
CA A:CYS1081 4.7 28.8 1.0
CB A:ILE1091 4.9 27.8 1.0
C A:VAL1083 4.9 34.1 1.0
O A:HOH2114 4.9 33.5 1.0
N A:VAL1083 4.9 34.1 1.0

Zinc binding site 2 out of 2 in 4bu3

Go back to Zinc Binding Sites List in 4bu3
Zinc binding site 2 out of 2 in the Crystal Structure of Human Tankyrase 2 in Complex with 2-Phenyl-3,4-Dihydroquinazolin-4-One


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Crystal Structure of Human Tankyrase 2 in Complex with 2-Phenyl-3,4-Dihydroquinazolin-4-One within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Zn2162

b:23.0
occ:1.00
ND1 B:HIS1084 2.2 28.8 1.0
SG B:CYS1089 2.3 21.6 1.0
SG B:CYS1092 2.3 21.9 1.0
SG B:CYS1081 2.4 25.8 1.0
CE1 B:HIS1084 3.1 28.8 1.0
CB B:CYS1089 3.2 22.7 1.0
CB B:CYS1081 3.2 26.6 1.0
CG B:HIS1084 3.3 28.8 1.0
CB B:CYS1092 3.3 22.2 1.0
CB B:HIS1084 3.7 26.8 1.0
N B:CYS1092 3.9 22.6 1.0
N B:HIS1084 4.0 26.3 1.0
O B:HOH2107 4.2 25.3 1.0
NE2 B:HIS1084 4.2 29.9 1.0
CA B:CYS1092 4.2 22.5 1.0
O B:HOH2103 4.2 38.7 1.0
CD2 B:HIS1084 4.3 29.1 1.0
CB B:VAL1083 4.4 27.8 1.0
CA B:HIS1084 4.4 26.8 1.0
CA B:CYS1089 4.6 22.8 1.0
CA B:CYS1081 4.7 26.5 1.0
CB B:ILE1091 4.7 24.7 1.0
O B:HOH2097 4.8 27.1 1.0
C B:VAL1083 4.8 26.5 1.0
CG1 B:VAL1083 4.9 29.1 1.0
N B:VAL1083 4.9 26.5 1.0
CA B:VAL1083 4.9 26.9 1.0

Reference:

T.Haikarainen, J.Koivunen, M.Narwal, H.Venkannagari, E.Obaji, P.Joensuu, T.Pihlajaniemi, L.Lehtio. Para-Substituted 2-Phenyl-3,4-Dihydroquinazolin-4-Ones As Potent and Selective Tankyrase Inhibitors. Chemmedchem V. 8 1978 2013.
ISSN: ISSN 1860-7179
PubMed: 24130191
DOI: 10.1002/CMDC.201300337
Page generated: Sat Oct 26 19:59:00 2024

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