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Zinc in PDB 4bpd: Structure Determination of An Integral Membrane Kinase

Enzymatic activity of Structure Determination of An Integral Membrane Kinase

All present enzymatic activity of Structure Determination of An Integral Membrane Kinase:
2.7.1.107;

Protein crystallography data

The structure of Structure Determination of An Integral Membrane Kinase, PDB code: 4bpd was solved by D.Li, C.Boland, M.Caffrey, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 57.035 / 3.30
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 74.870, 93.430, 144.020, 90.00, 90.00, 90.00
R / Rfree (%) 24.1 / 28.21

Zinc Binding Sites:

The binding sites of Zinc atom in the Structure Determination of An Integral Membrane Kinase (pdb code 4bpd). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Structure Determination of An Integral Membrane Kinase, PDB code: 4bpd:

Zinc binding site 1 out of 1 in 4bpd

Go back to Zinc Binding Sites List in 4bpd
Zinc binding site 1 out of 1 in the Structure Determination of An Integral Membrane Kinase


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Structure Determination of An Integral Membrane Kinase within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Zn1122

b:0.2
occ:1.00
OE2 D:GLU28 2.0 0.8 1.0
OE1 D:GLU28 2.0 0.5 1.0
OE1 D:GLU76 2.0 0.4 1.0
OE2 D:GLU76 2.0 0.0 1.0
CD D:GLU28 2.2 0.8 1.0
CD D:GLU76 2.3 0.3 1.0
CG D:GLU28 3.5 89.4 1.0
CG D:GLU76 3.7 94.7 1.0
OG D:SER73 4.4 69.4 1.0
CB D:GLU76 4.5 72.8 1.0
CB D:GLU28 4.5 66.8 1.0
CB D:SER73 4.9 67.1 1.0

Reference:

.Boland, D.Li, S.T.A.Shah, S.Haberstock, V.Dotsch, F.Bernhard, M.Caffrey. Cell-Free Expression and in Meso Crystallisation of An Integral Membrane Kinase For Structure Determination. Cell.Mol.Life Sci. 2014.
ISSN: ESSN 1420-9071
PubMed: 25012698
DOI: 10.1007/S00018-014-1655-7
Page generated: Sat Oct 26 19:53:21 2024

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