Zinc in PDB 3zj1: Structure of NAB2P Tandem Zinc Finger 12

The binding sites of Zinc atom in the Structure of NAB2P Tandem Zinc Finger 12 (pdb code 3zj1). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Structure of NAB2P Tandem Zinc Finger 12, PDB code: 3zj1:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the Structure of NAB2P Tandem Zinc Finger 12


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Structure of NAB2P Tandem Zinc Finger 12 within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn401 b:0.0 occ:1.00 NE2 A:HIS278 2.3 0.0 1.0 SG A:CYS274 2.4 0.0 1.0 SG A:CYS262 2.5 0.0 1.0 SG A:CYS268 2.5 0.0 1.0 CE1 A:HIS278 3.3 0.0 1.0 CD2 A:HIS278 3.4 0.0 1.0 HE1 A:HIS278 3.5 0.0 1.0 CB A:CYS274 3.5 0.0 1.0 CB A:CYS268 3.5 0.0 1.0 HB3 A:CYS274 3.6 0.0 1.0 HD2 A:HIS278 3.6 0.0 1.0 CB A:CYS262 3.6 0.0 1.0 HB3 A:CYS268 3.6 0.0 1.0 HB2 A:CYS262 3.6 0.0 1.0 HB2 A:CYS268 3.6 0.0 1.0 HB2 A:CYS274 3.6 0.0 1.0 HB3 A:CYS262 3.8 0.0 1.0 HB2 A:HIS276 4.1 0.0 1.0 HB2 A:LEU270 4.1 0.0 1.0 HB2 A:PHE265 4.3 0.0 1.0 ND1 A:HIS278 4.5 0.0 1.0 HB2 A:LEU264 4.5 0.0 1.0 CG A:HIS278 4.5 0.0 1.0 H A:HIS276 4.6 0.0 1.0 O A:HIS276 4.7 0.0 1.0 HD2 A:PHE265 4.7 0.0 1.0 H A:LEU270 4.8 0.0 1.0 CA A:CYS274 5.0 0.0 1.0 CA A:CYS268 5.0 0.0 1.0 H A:PHE265 5.0 0.0 1.0 CA A:CYS262 5.0 0.0 1.0 H A:LEU264 5.0 0.0 1.0

Zinc binding site 2 out of 2 in the Structure of NAB2P Tandem Zinc Finger 12


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Structure of NAB2P Tandem Zinc Finger 12 within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn402 b:0.0 occ:1.00 NE2 A:HIS300 2.3 0.0 1.0 SG A:CYS283 2.4 0.0 1.0 SG A:CYS289 2.4 0.0 1.0 SG A:CYS296 2.4 0.0 1.0 CE1 A:HIS300 3.2 0.0 1.0 HE1 A:HIS300 3.2 0.0 1.0 HB2 A:CYS283 3.3 0.0 1.0 CD2 A:HIS300 3.4 0.0 1.0 HB2 A:CYS289 3.4 0.0 1.0 CB A:CYS283 3.5 0.0 1.0 HB2 A:CYS296 3.5 0.0 1.0 CB A:CYS289 3.5 0.0 1.0 CB A:CYS296 3.6 0.0 1.0 HB2 A:PHE298 3.7 0.0 1.0 HD2 A:PHE298 3.7 0.0 1.0 HD2 A:HIS300 3.7 0.0 1.0 HB3 A:CYS296 3.8 0.0 1.0 HB3 A:CYS289 3.8 0.0 1.0 HB3 A:CYS283 3.9 0.0 1.0 HB2 A:LYS291 4.1 0.0 1.0 HG3 A:LYS291 4.3 0.0 1.0 H A:PHE298 4.3 0.0 1.0 ND1 A:HIS300 4.4 0.0 1.0 HB2 A:TYR286 4.4 0.0 1.0 CG A:HIS300 4.5 0.0 1.0 H A:TYR286 4.5 0.0 1.0 HG2 A:LYS291 4.7 0.0 1.0 H A:GLU285 4.7 0.0 1.0 CD2 A:PHE298 4.7 0.0 1.0 CB A:PHE298 4.7 0.0 1.0 HA A:CYS283 4.8 0.0 1.0 CA A:CYS283 4.8 0.0 1.0 HA A:CYS289 4.9 0.0 1.0 CG A:LYS291 4.9 0.0 1.0 CA A:CYS289 4.9 0.0 1.0 CA A:CYS296 4.9 0.0 1.0 CB A:LYS291 5.0 0.0 1.0

S.Martinez-Lumbreras, C.M.Santiveri, Y.Mirassou, S.Zorrilla, J.M.Perez-Canadillas. Two Singular Types of Ccch Tandem Zinc Finger in NAB2P Contribute to Polyadenosine Rna Recognition. Structure V. 21 1800 2013.
ISSN: ISSN 0969-2126
PubMed: 23994011
DOI: 10.1016/J.STR.2013.07.019