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Zinc in PDB 3sat: Mutm Slanted Complex 6 with R112A Mutation

Enzymatic activity of Mutm Slanted Complex 6 with R112A Mutation

All present enzymatic activity of Mutm Slanted Complex 6 with R112A Mutation:
4.2.99.18;

Protein crystallography data

The structure of Mutm Slanted Complex 6 with R112A Mutation, PDB code: 3sat was solved by Y.Qi, G.L.Verdine, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 26.29 / 2.15
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 45.487, 97.574, 102.371, 90.00, 90.00, 90.00
R / Rfree (%) 18.7 / 22.5

Zinc Binding Sites:

The binding sites of Zinc atom in the Mutm Slanted Complex 6 with R112A Mutation (pdb code 3sat). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Mutm Slanted Complex 6 with R112A Mutation, PDB code: 3sat:

Zinc binding site 1 out of 1 in 3sat

Go back to Zinc Binding Sites List in 3sat
Zinc binding site 1 out of 1 in the Mutm Slanted Complex 6 with R112A Mutation


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Mutm Slanted Complex 6 with R112A Mutation within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn300

b:26.8
occ:1.00
SG A:CYS272 2.3 27.0 1.0
SG A:CYS249 2.3 27.1 1.0
SG A:CYS269 2.3 26.6 1.0
SG A:CYS252 2.4 25.1 1.0
CB A:CYS249 3.2 30.8 1.0
CB A:CYS272 3.3 28.7 1.0
CB A:CYS269 3.4 26.7 1.0
CB A:CYS252 3.4 33.0 1.0
N A:CYS272 3.8 24.1 1.0
N A:CYS252 3.8 27.0 1.0
CA A:CYS272 4.1 28.1 1.0
CE1 A:PHE182 4.1 26.4 1.0
CA A:CYS252 4.1 30.0 1.0
CB A:ARG271 4.6 29.7 1.0
CZ A:PHE182 4.6 26.6 1.0
CA A:CYS249 4.6 27.8 1.0
C A:ARG251 4.7 35.0 1.0
CB A:THR254 4.8 33.3 1.0
CA A:CYS269 4.8 27.0 1.0
C A:CYS252 4.8 29.4 1.0
CB A:ARG251 4.8 32.7 1.0
C A:ARG271 4.8 25.5 1.0
N A:GLY253 4.9 28.7 1.0
N A:THR254 4.9 29.7 1.0
N A:ARG251 5.0 24.9 1.0

Reference:

Y.Qi, K.Nam, M.C.Spong, A.Banerjee, R.J.Sung, M.Zhang, M.Karplus, G.L.Verdine. Strandwise Translocation of A Dna Glycosylase on Undamaged Dna. Proc.Natl.Acad.Sci.Usa V. 109 1086 2012.
ISSN: ISSN 0027-8424
PubMed: 22219368
DOI: 10.1073/PNAS.1111237108
Page generated: Wed Dec 16 04:49:37 2020

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