Chemical elements
    Physical Properties
    Chemical Properties
    PDB 12ca-1ai0
    PDB 1aiy-1b6z
    PDB 1b71-1bs8
    PDB 1bsk-1cao
    PDB 1caq-1ctt
    PDB 1ctu-1de6
    PDB 1def-1dy0
    PDB 1dy1-1ed6
    PDB 1ed8-1exk
    PDB 1eyf-1fj9
    PDB 1fjg-1g0e
    PDB 1g0f-1gkq
    PDB 1gkr-1ha5
    PDB 1hbm-1hso
    PDB 1hsz-1i6v
    PDB 1i73-1im5
    PDB 1iml-1jcv
    PDB 1jcz-1jy8
    PDB 1jyb-1kh4
    PDB 1kh5-1kys
    PDB 1kzo-1llm
    PDB 1llu-1m7j
    PDB 1m9j-1mwo
    PDB 1mwq-1ndv
    PDB 1ndw-1nyq
    PDB 1nyr-1os4
    PDB 1os9-1p9w
    PDB 1paa-1pud
    PDB 1pv8-1q9l
    PDB 1q9m-1qv6
    PDB 1qv7-1r6o
    PDB 1r79-1ro9
    PDB 1ror-1sfo
    PDB 1sg0-1t3k
    PDB 1t4k-1tkh
    PDB 1tkj-1u0l
    PDB 1u10-1ums
    PDB 1umt-1v67
    PDB 1v6g-1vrq
    PDB 1vs0-1wew
    PDB 1wfe-1wwf
    PDB 1wwg-1xb1
    PDB 1xb8-1xpz
    PDB 1xq0-1y5w
    PDB 1y5x-1ylk
    PDB 1ylo-1z8r
    PDB 1z93-1zkx
    PDB 1zl6-258l
    PDB 2a03-2afo
    PDB 2afs-2atq
    PDB 2au3-2bfz
    PDB 2bg2-2c3a
    PDB 2c4r-2cij
    PDB 2cim-2czr
    PDB 2d0w-2djw
    PDB 2dkc-2e1b
    PDB 2e1s-2eer
    PDB 2eex-2em4
    PDB 2em5-2eoj
    PDB 2eok-2erq
    PDB 2esf-2fa7
    PDB 2fac-2fpx
    PDB 2fqp-2g84
    PDB 2g87-2gvf
    PDB 2gvi-2han
    PDB 2hap-2huc
    PDB 2hue-2imc
    PDB 2imr-2j65
    PDB 2j6a-2jq5
    PDB 2jr7-2kfn
    PDB 2kft-2l75
    PDB 2lgv-2nx9
    PDB 2nxa-2oc8
    PDB 2occ-2osm
    PDB 2oso-2p53
    PDB 2p57-2pow
    PDB 2ppb-2q8j
    PDB 2qa1-2qp6
    PDB 2qpj-2r71
    PDB 2r74-2sod
    PDB 2srt-2v86
    PDB 2v87-2vp7
    PDB 2vpb-2vyo
    PDB 2vz5-2wey
    PDB 2wfq-2wx0
    PDB 2wx1-2xam
    PDB 2xan-2xr9
    PDB 2xrg-2ytd
    PDB 2yte-2z30
    PDB 2z3g-2zet
    PDB 2zh0-3a32
    PDB 3a36-3aoi
    PDB 3at1-3bk1
    PDB 3bk2-3byr
    PDB 3byw-3cia
    PDB 3ciz-3d08
    PDB 3d09-3dbu
    PDB 3dc3-3dp6
    PDB 3dpe-3e1w
    PDB 3e1z-3ebh
    PDB 3ebi-3epk
    PDB 3epl-3f28
    PDB 3f2b-3fhe
    PDB 3fhp-3ful
    PDB 3fum-3g9y
    PDB 3ga3-3gpu
    PDB 3gpx-3h2w
    PDB 3h3e-3hfy
    PDB 3hgz-3hsn
    PDB 3hso-3i8v
    PDB 3i9b-3ij6
    PDB 3ijf-3ixe
    PDB 3iz0-3k34
    PDB 3k35-3kiy
    PDB 3kj1-3kvt
    PDB 3kwa-3lat
    PDB 3lcn-3lrr
    PDB 3ls1-3m1n
    PDB 3m1v-3mek
    PDB 3men-3mru
    PDB 3ms0-3n63
    PDB 3n64-3nin
    PDB 3nis-3ny2
    PDB 3ny3-3ohc
    PDB 3ohd-3oyl
    PDB 3oym-3pih
    PDB 3pki-3r0d
    PDB 3rj7-3t74
    PDB 3t87-3u9g
    PDB 3ua7-3v24
    PDB 3v25-4agl
    PDB 4agm-4dih
    PDB 4dii-4efs
    PDB 4eg2-4fc8
    PDB 4fgm-6tli
    PDB 6tmn-9nse

Zinc in the structure of Crystal Structure of the Escherichia Coli Lpxc/Lpc-012 Complex (pdb 3ps2)

The binding sites of Zinc atom in the structure of Crystal Structure of the Escherichia Coli Lpxc/Lpc-012 Complex (pdb code 3ps2). This binding sites where shown with 5.0 Angstroms radius around Zinc atom.
The 3ps2 structure was solved by C.-J LEE, P.ZHOU, with X-Ray Crystallography technique, brief refinement statistics is given in the table below:
Resolution (A)26.9-2.3
Space groupP61
a (A)107.449
b (A)107.449
c (A)53.422
alpha (°)90.00
beta (°)90.00
gamma (°)120.00
Rfactor (%)20.7
Rfree (%)26.1

Zinc Binding Sites:

Zinc binding site 1 out of 1 in 3ps2

Zinc binding site 1 out of 1 in 3ps2
Click to enlarge
stereopicture of Zinc binding site 1 out of 1 in 3ps2
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 1 of Zinc in the PDB 3ps2. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Zinc atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Glu78, A: His79, A: Thr191, A: His238, A: Leu241, A: Asp242, A: His265, A: Zh4401,

conact list:

AtomAtomDistance (A)
ZnHG3 A:Glu783.91
ZnOE2 A:Glu784.24
ZnCD A:Glu784.85
ZnCG A:Glu784.46
ZnHG2 A:Glu784.20
ZnCD2 A:His793.00
ZnHD1 A:His794.98
ZnCG A:His794.17
ZnHD2 A:His793.13
ZnNE2 A:His792.08
ZnHE1 A:His793.35
ZnND1 A:His794.19
ZnCE1 A:His793.12
ZnHB A:Thr1913.64
ZnCB A:Thr1914.32
ZnHG1 A:Thr1913.62
ZnCA A:Thr1914.97
ZnHA A:Thr1914.53
ZnOG1 A:Thr1914.14
ZnCD2 A:His2383.07
ZnHD1 A:His2384.80
ZnCG A:His2384.14
ZnHD2 A:His2383.30
ZnO A:His2384.72
ZnNE2 A:His2382.06
ZnHE1 A:His2383.11
ZnND1 A:His2384.05
ZnCE1 A:His2382.95
ZnHD23 A:Leu2414.33
ZnHB2 A:Asp2424.36
ZnCB A:Asp2423.94
ZnHB3 A:Asp2424.35
ZnHA A:Asp2424.40
ZnOD2 A:Asp2422.16
ZnH A:Asp2424.93
ZnOD1 A:Asp2422.05
ZnCG A:Asp2422.42
ZnCA A:Asp2424.71
ZnNE2 A:His2654.73
ZnHE1 A:His2654.06
ZnCE1 A:His2654.70
ZnN03 A:Zh44012.92
ZnC05 A:Zh44014.23
ZnO01 A:Zh44012.06
ZnC02 A:Zh44012.83
ZnO04 A:Zh44012.22
ZnN06 A:Zh44014.82
ZnC26 A:Zh44014.92
ZnO27 A:Zh44014.92

interactive model:

© Copyright 2008-2012 by