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Zinc in PDB 2rcn: Crystal Structure of the Ribosomal Interacting Gtpase Yjeq From the Enterobacterial Species Salmonella Typhimurium.

Protein crystallography data

The structure of Crystal Structure of the Ribosomal Interacting Gtpase Yjeq From the Enterobacterial Species Salmonella Typhimurium., PDB code: 2rcn was solved by C.E.Nichols, D.K.Stammers, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 27.89 / 2.25
Space group P 31 2 1
Cell size a, b, c (Å), α, β, γ (°) 92.838, 92.838, 70.227, 90.00, 90.00, 120.00
R / Rfree (%) 19.9 / 26.7

Other elements in 2rcn:

The structure of Crystal Structure of the Ribosomal Interacting Gtpase Yjeq From the Enterobacterial Species Salmonella Typhimurium. also contains other interesting chemical elements:

Magnesium (Mg) 1 atom

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of the Ribosomal Interacting Gtpase Yjeq From the Enterobacterial Species Salmonella Typhimurium. (pdb code 2rcn). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of the Ribosomal Interacting Gtpase Yjeq From the Enterobacterial Species Salmonella Typhimurium., PDB code: 2rcn:

Zinc binding site 1 out of 1 in 2rcn

Go back to Zinc Binding Sites List in 2rcn
Zinc binding site 1 out of 1 in the Crystal Structure of the Ribosomal Interacting Gtpase Yjeq From the Enterobacterial Species Salmonella Typhimurium.


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of the Ribosomal Interacting Gtpase Yjeq From the Enterobacterial Species Salmonella Typhimurium. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn359

b:30.5
occ:1.00
ND1 A:HIS312 2.2 21.9 1.0
SG A:CYS305 2.4 26.9 1.0
SG A:CYS310 2.4 26.5 1.0
SG A:CYS318 2.4 23.8 1.0
CE1 A:HIS312 3.1 24.0 1.0
CB A:CYS318 3.2 27.3 1.0
CG A:HIS312 3.3 24.8 1.0
CB A:CYS310 3.4 24.9 1.0
CB A:CYS305 3.4 23.7 1.0
CA A:HIS312 3.5 27.6 1.0
CA A:CYS318 3.6 32.7 1.0
CB A:HIS312 3.6 21.8 1.0
N A:HIS312 3.7 24.1 1.0
N A:ALA319 4.1 22.9 1.0
C A:CYS318 4.2 27.3 1.0
NE2 A:HIS312 4.3 25.6 1.0
CD2 A:HIS312 4.4 31.7 1.0
O A:HOH601 4.4 25.1 1.0
O A:CYS310 4.4 29.3 1.0
C A:CYS310 4.5 30.4 1.0
N A:ILE320 4.5 32.7 1.0
CA A:CYS310 4.5 29.8 1.0
CB A:ILE320 4.7 22.6 1.0
CG1 A:ILE320 4.7 25.9 1.0
CA A:CYS305 4.7 22.9 1.0
O A:HOH693 4.8 19.5 1.0
C A:HIS312 4.8 28.3 1.0
N A:CYS318 4.9 32.0 1.0
C A:LYS311 4.9 27.9 1.0
CD1 A:ILE320 5.0 22.8 1.0
N A:LYS311 5.0 31.8 1.0

Reference:

C.E.Nichols, C.Johnson, H.K.Lamb, M.Lockyer, I.G.Charles, A.R.Hawkins, D.K.Stammers. Structure of the Ribosomal Interacting Gtpase Yjeq From the Enterobacterial Species Salmonella Typhimurium. Acta Crystallogr.,Sect.F V. 63 922 2007.
ISSN: ESSN 1744-3091
PubMed: 18007041
DOI: 10.1107/S1744309107048609
Page generated: Wed Dec 16 03:51:57 2020

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