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Zinc in PDB 2qmz: Quinone Reductase 2 in Complex with Dopamine

Enzymatic activity of Quinone Reductase 2 in Complex with Dopamine

All present enzymatic activity of Quinone Reductase 2 in Complex with Dopamine:
1.10.99.2;

Protein crystallography data

The structure of Quinone Reductase 2 in Complex with Dopamine, PDB code: 2qmz was solved by Y.Fu, L.Buryanovskyy, Z.Zhang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 2.10
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 83.442, 106.448, 56.533, 90.00, 90.00, 90.00
R / Rfree (%) 19.3 / 23.8

Zinc Binding Sites:

The binding sites of Zinc atom in the Quinone Reductase 2 in Complex with Dopamine (pdb code 2qmz). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Quinone Reductase 2 in Complex with Dopamine, PDB code: 2qmz:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 2qmz

Go back to Zinc Binding Sites List in 2qmz
Zinc binding site 1 out of 2 in the Quinone Reductase 2 in Complex with Dopamine


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Quinone Reductase 2 in Complex with Dopamine within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn231

b:30.3
occ:1.00
ND1 A:HIS173 2.2 23.5 1.0
SG A:CYS222 2.3 29.5 1.0
O A:CYS222 2.4 31.3 1.0
CD2 A:HIS177 2.7 33.9 1.0
CB A:CYS222 2.8 31.5 1.0
CG A:HIS177 3.0 33.4 1.0
CG A:HIS173 3.1 21.6 1.0
C A:CYS222 3.1 31.5 1.0
CE1 A:HIS173 3.2 23.6 1.0
CB A:HIS177 3.2 28.4 1.0
CB A:HIS173 3.4 19.5 1.0
CA A:HIS173 3.6 20.3 1.0
CA A:CYS222 3.6 31.8 1.0
NE2 A:HIS177 3.6 35.7 1.0
ND1 A:HIS177 4.0 35.2 1.0
N A:THR223 4.2 30.9 1.0
O B:HOH608 4.2 53.0 1.0
CE1 A:HIS177 4.2 35.2 1.0
CD2 A:HIS173 4.3 23.0 1.0
NE2 A:HIS173 4.3 24.4 1.0
N A:HIS173 4.5 19.7 1.0
C A:HIS173 4.5 19.9 1.0
O A:HIS173 4.6 22.5 1.0
O A:GLN172 4.6 21.1 1.0
CA A:THR223 4.7 30.5 1.0
N A:CYS222 4.7 33.4 1.0
CA A:HIS177 4.8 26.9 1.0
C A:GLN172 4.9 19.1 1.0
CE1 A:TYR132 4.9 40.3 1.0
CE1 A:HIS227 5.0 29.4 1.0

Zinc binding site 2 out of 2 in 2qmz

Go back to Zinc Binding Sites List in 2qmz
Zinc binding site 2 out of 2 in the Quinone Reductase 2 in Complex with Dopamine


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Quinone Reductase 2 in Complex with Dopamine within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Zn232

b:22.9
occ:1.00
ND1 B:HIS173 2.2 14.5 1.0
O B:CYS222 2.3 18.2 1.0
ND1 B:HIS177 2.3 21.4 1.0
SG B:CYS222 2.4 21.1 1.0
CB B:CYS222 2.8 21.1 1.0
C B:CYS222 3.0 18.8 1.0
CG B:HIS173 3.1 14.6 1.0
CG B:HIS177 3.2 19.6 1.0
CE1 B:HIS173 3.2 13.6 1.0
CB B:HIS173 3.3 13.2 1.0
CB B:HIS177 3.3 13.9 1.0
CE1 B:HIS177 3.4 20.9 1.0
CA B:CYS222 3.5 20.0 1.0
CA B:HIS173 3.5 15.1 1.0
N B:THR223 4.1 18.6 1.0
CD2 B:HIS173 4.3 14.1 1.0
NE2 B:HIS173 4.3 15.3 1.0
CD2 B:HIS177 4.4 21.6 1.0
NE2 B:HIS177 4.4 21.9 1.0
N B:HIS173 4.4 14.4 1.0
C B:HIS173 4.6 15.4 1.0
O B:GLN172 4.6 12.9 1.0
CA B:THR223 4.6 18.0 1.0
N B:CYS222 4.7 20.6 1.0
O B:HIS173 4.7 14.5 1.0
CA B:HIS177 4.8 14.2 1.0
C B:GLN172 4.9 13.7 1.0

Reference:

Y.Fu, L.Buryanovskyy, Z.Zhang. Quinone Reductase 2 Regulates Catecholamine Oxidation To Be Published.
Page generated: Thu Oct 17 03:30:52 2024

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