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Zinc in PDB 2qh0: Crystal Structure of A Glyoxalase From Clostridium Acetobutylicum

Protein crystallography data

The structure of Crystal Structure of A Glyoxalase From Clostridium Acetobutylicum, PDB code: 2qh0 was solved by K.N.Rao, S.K.Burley, S.Swaminathan, New York Sgx Research Center Forstructural Genomics (Nysgxrc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 39.48 / 2.45
Space group P 41 21 2
Cell size a, b, c (Å), α, β, γ (°) 71.100, 71.100, 63.760, 90.00, 90.00, 90.00
R / Rfree (%) 23.5 / 29.9

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of A Glyoxalase From Clostridium Acetobutylicum (pdb code 2qh0). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of A Glyoxalase From Clostridium Acetobutylicum, PDB code: 2qh0:

Zinc binding site 1 out of 1 in 2qh0

Go back to Zinc Binding Sites List in 2qh0
Zinc binding site 1 out of 1 in the Crystal Structure of A Glyoxalase From Clostridium Acetobutylicum


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of A Glyoxalase From Clostridium Acetobutylicum within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn450

b:33.9
occ:1.00
OE2 A:GLU126 2.0 32.3 1.0
OE1 A:GLU54 2.0 34.8 1.0
O A:HOH452 2.1 41.3 1.0
NE2 A:HIS7 2.4 19.0 1.0
NE2 A:HIS77 2.4 26.0 1.0
CD A:GLU126 2.9 32.8 1.0
CD A:GLU54 3.0 34.4 1.0
CE1 A:HIS7 3.2 21.4 1.0
CE1 A:HIS77 3.2 21.4 1.0
OE1 A:GLU126 3.3 33.6 1.0
OE2 A:GLU54 3.3 36.2 1.0
CD2 A:HIS7 3.5 22.5 1.0
CD2 A:HIS77 3.5 24.3 1.0
O A:HOH451 4.2 37.9 1.0
CG A:GLU54 4.3 30.8 1.0
CG A:GLU126 4.3 34.7 1.0
ND1 A:HIS7 4.4 20.7 1.0
ND1 A:HIS77 4.4 22.8 1.0
CB A:CYS79 4.4 25.5 1.0
CB A:GLU54 4.6 29.7 1.0
CG A:HIS7 4.6 22.0 1.0
CG A:HIS77 4.6 24.9 1.0
CA A:GLY9 4.7 24.8 1.0
CB A:GLU126 4.7 32.7 1.0
CZ A:PHE116 4.9 31.4 1.0
SG A:CYS79 5.0 30.8 1.0

Reference:

K.N.Rao, S.K.Burley, S.Swaminathan. Crystal Structure of A Glyoxalase From Clostridium Acetobutylicum. To Be Published.
Page generated: Thu Oct 17 03:27:27 2024

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