Zinc in PDB 2pw6: Crystal Structure of Uncharacterized Protein JW3007 From Escherichia Coli K12

The structure of Crystal Structure of Uncharacterized Protein JW3007 From Escherichia Coli K12, PDB code: 2pw6 was solved by M.G.Newton, Y.Takagi, A.Ebihara, A.Shinkai, S.Kuramitsu, S.Yokayama, Y.Li, L.Chen, J.Zhu, J.Ruble, Z.J.Liu, J.P.Rose, B.-C.Wang, Southeastcollaboratory For Structural Genomics (Secsg), Riken Structuralgenomics/Proteomics Initiative (Rsgi), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	72.74 / 2.27
Space group	P 31 2 1
Cell size a, b, c (Å), α, β, γ (°)	83.940, 83.940, 85.509, 90.00, 90.00, 120.00
R / Rfree (%)	23.5 / 26.7

The binding sites of Zinc atom in the Crystal Structure of Uncharacterized Protein JW3007 From Escherichia Coli K12 (pdb code 2pw6). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 3 binding sites of Zinc where determined in the Crystal Structure of Uncharacterized Protein JW3007 From Escherichia Coli K12, PDB code: 2pw6:
Jump to Zinc binding site number: 1; 2; 3;

Zinc binding site 1 out of 3 in the Crystal Structure of Uncharacterized Protein JW3007 From Escherichia Coli K12


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of Uncharacterized Protein JW3007 From Escherichia Coli K12 within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn272 b:23.1 occ:1.00 NE2 A:HIS234 2.0 21.5 1.0 NE2 A:HIS57 2.3 35.2 1.0 NE2 A:HIS22 2.4 36.3 1.0 O A:HOH277 2.7 31.6 1.0 CE1 A:HIS234 3.0 20.1 1.0 CD2 A:HIS234 3.0 24.7 1.0 CD2 A:HIS57 3.2 34.1 1.0 CE1 A:HIS22 3.3 38.7 1.0 CE1 A:HIS57 3.3 38.9 1.0 CD2 A:HIS22 3.4 37.7 1.0 ND1 A:HIS234 4.1 25.8 1.0 CG A:HIS234 4.1 22.3 1.0 OD1 A:ASN174 4.2 35.0 1.0 NE2 A:HIS177 4.2 33.9 1.0 CG A:HIS57 4.4 34.9 1.0 ND1 A:HIS57 4.4 35.4 1.0 ND1 A:HIS22 4.4 40.4 1.0 CG A:HIS22 4.5 40.3 1.0 CD2 A:HIS177 4.6 30.8 1.0 CB A:ALA56 4.8 31.9 1.0 OD2 A:ASP120 4.9 36.9 1.0

Zinc binding site 2 out of 3 in the Crystal Structure of Uncharacterized Protein JW3007 From Escherichia Coli K12


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Crystal Structure of Uncharacterized Protein JW3007 From Escherichia Coli K12 within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn273 b:31.6 occ:0.50 ND1 A:HIS121 2.5 38.2 1.0 CE1 A:HIS121 3.4 40.9 1.0 CG A:HIS121 3.5 39.1 1.0 CB A:HIS121 3.8 37.6 1.0 N A:HIS121 4.5 37.0 1.0 CD1 A:TYR85 4.5 39.1 1.0 NE2 A:HIS121 4.6 39.8 1.0 CD2 A:HIS121 4.6 38.8 1.0 CA A:HIS121 4.7 38.3 1.0

Zinc binding site 3 out of 3 in the Crystal Structure of Uncharacterized Protein JW3007 From Escherichia Coli K12


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 3 of Crystal Structure of Uncharacterized Protein JW3007 From Escherichia Coli K12 within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn274 b:12.6 occ:0.50 ND1 A:HIS177 2.0 32.2 1.0 O A:HIS177 2.3 41.3 1.0 CE1 A:HIS177 2.8 34.6 1.0 CG A:HIS177 3.2 35.1 1.0 C A:HIS177 3.3 39.8 1.0 CB A:HIS177 3.8 37.8 1.0 OE2 A:GLU233 3.9 37.3 1.0 NE2 A:HIS177 4.0 33.9 1.0 CA A:HIS177 4.2 38.5 1.0 N A:ASN178 4.2 41.5 1.0 CD2 A:HIS177 4.2 30.8 1.0 CD A:PRO230 4.3 38.4 1.0 CA A:ASN178 4.3 41.9 1.0 OG1 A:THR231 4.4 36.9 1.0 N A:LEU179 4.7 42.5 1.0 ND1 A:HIS234 4.8 25.8 1.0 CG A:PRO230 4.9 38.6 1.0

M.G.Newton, Y.Takagi, A.Ebihara, A.Shinkai, S.Kuramitsu, S.Yokayama, Y.Li, L.Chen, J.Zhu, J.Ruble, Z.J.Liu, J.P.Rose, B.-C.Wang. Crystal Structure of Uncharacterized Protein JW3007 From Escherichia Coli K12. To Be Published.