Zinc in PDB 2o13: Solution Structure of the C-Terminal Lim Domain of Mlp/CRP3
Zinc Binding Sites:
The binding sites of Zinc atom in the Solution Structure of the C-Terminal Lim Domain of Mlp/CRP3
(pdb code 2o13). This binding sites where shown within
5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the
Solution Structure of the C-Terminal Lim Domain of Mlp/CRP3, PDB code: 2o13:
Jump to Zinc binding site number:
1;
2;
Zinc binding site 1 out
of 2 in 2o13
Go back to
Zinc Binding Sites List in 2o13
Zinc binding site 1 out
of 2 in the Solution Structure of the C-Terminal Lim Domain of Mlp/CRP3
Mono view
Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 1 of Solution Structure of the C-Terminal Lim Domain of Mlp/CRP3 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Zn190
b:0.5
occ:1.00
|
SG
|
A:CYS147
|
2.3
|
0.7
|
1.0
|
SG
|
A:CYS150
|
2.3
|
0.8
|
1.0
|
SG
|
A:CYS171
|
2.3
|
0.8
|
1.0
|
SG
|
A:CYS168
|
2.3
|
0.5
|
1.0
|
HB3
|
A:CYS147
|
3.1
|
0.6
|
1.0
|
HB2
|
A:CYS168
|
3.1
|
0.5
|
1.0
|
HB3
|
A:LYS152
|
3.2
|
0.9
|
1.0
|
H
|
A:CYS150
|
3.2
|
0.6
|
1.0
|
HB3
|
A:CYS150
|
3.2
|
0.9
|
1.0
|
HB2
|
A:CYS171
|
3.3
|
0.7
|
1.0
|
CB
|
A:CYS147
|
3.3
|
0.4
|
1.0
|
H
|
A:CYS168
|
3.4
|
0.3
|
1.0
|
CB
|
A:CYS168
|
3.4
|
0.5
|
1.0
|
CB
|
A:CYS171
|
3.4
|
0.6
|
1.0
|
CB
|
A:CYS150
|
3.4
|
0.8
|
1.0
|
HB
|
A:ILE149
|
3.7
|
0.7
|
1.0
|
H
|
A:CYS147
|
3.7
|
0.4
|
1.0
|
HB3
|
A:CYS171
|
3.8
|
0.7
|
1.0
|
H
|
A:LYS152
|
3.8
|
0.5
|
1.0
|
O
|
A:CYS147
|
3.9
|
0.5
|
1.0
|
HD3
|
A:LYS152
|
3.9
|
2.0
|
1.0
|
N
|
A:CYS150
|
3.9
|
0.7
|
1.0
|
HB3
|
A:CYS168
|
4.1
|
0.6
|
1.0
|
CA
|
A:CYS147
|
4.1
|
0.4
|
1.0
|
HB2
|
A:CYS147
|
4.1
|
0.7
|
1.0
|
H
|
A:GLY151
|
4.2
|
0.6
|
1.0
|
N
|
A:CYS168
|
4.2
|
0.3
|
1.0
|
HB2
|
A:CYS150
|
4.2
|
1.0
|
1.0
|
N
|
A:CYS147
|
4.2
|
0.4
|
1.0
|
H
|
A:CYS171
|
4.2
|
0.6
|
1.0
|
CB
|
A:LYS152
|
4.3
|
0.8
|
1.0
|
C
|
A:CYS147
|
4.3
|
0.5
|
1.0
|
CA
|
A:CYS150
|
4.3
|
0.8
|
1.0
|
H
|
A:ILE149
|
4.3
|
0.7
|
1.0
|
CA
|
A:CYS168
|
4.4
|
0.4
|
1.0
|
HB2
|
A:LYS152
|
4.6
|
1.0
|
1.0
|
HD2
|
A:LYS152
|
4.6
|
1.9
|
1.0
|
N
|
A:LYS152
|
4.6
|
0.6
|
1.0
|
CD
|
A:LYS152
|
4.7
|
1.4
|
1.0
|
CA
|
A:CYS171
|
4.7
|
0.6
|
1.0
|
CB
|
A:ILE149
|
4.7
|
0.8
|
1.0
|
O
|
A:LYS152
|
4.7
|
0.5
|
1.0
|
N
|
A:GLY151
|
4.8
|
0.7
|
1.0
|
N
|
A:CYS171
|
4.8
|
0.6
|
1.0
|
HA
|
A:TYR167
|
4.9
|
0.4
|
1.0
|
HD23
|
A:LEU154
|
4.9
|
1.3
|
1.0
|
HD13
|
A:ILE149
|
4.9
|
1.6
|
1.0
|
N
|
A:ILE149
|
5.0
|
0.8
|
1.0
|
CA
|
A:LYS152
|
5.0
|
0.6
|
1.0
|
C
|
A:ILE149
|
5.0
|
0.8
|
1.0
|
|
Zinc binding site 2 out
of 2 in 2o13
Go back to
Zinc Binding Sites List in 2o13
Zinc binding site 2 out
of 2 in the Solution Structure of the C-Terminal Lim Domain of Mlp/CRP3
Mono view
Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 2 of Solution Structure of the C-Terminal Lim Domain of Mlp/CRP3 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Zn191
b:0.8
occ:1.00
|
ND1
|
A:HIS141
|
2.1
|
0.7
|
1.0
|
SG
|
A:CYS144
|
2.3
|
1.1
|
1.0
|
SG
|
A:CYS123
|
2.3
|
0.9
|
1.0
|
SG
|
A:CYS120
|
2.3
|
0.7
|
1.0
|
HB2
|
A:HIS141
|
2.7
|
0.5
|
1.0
|
CE1
|
A:HIS141
|
3.0
|
0.7
|
1.0
|
CG
|
A:HIS141
|
3.0
|
0.5
|
1.0
|
HB2
|
A:CYS123
|
3.2
|
0.8
|
1.0
|
HE1
|
A:HIS141
|
3.2
|
0.9
|
1.0
|
HB2
|
A:CYS144
|
3.3
|
1.2
|
1.0
|
CB
|
A:CYS144
|
3.4
|
0.7
|
1.0
|
HB3
|
A:CYS120
|
3.4
|
0.7
|
1.0
|
CB
|
A:HIS141
|
3.4
|
0.4
|
1.0
|
CB
|
A:CYS123
|
3.4
|
0.8
|
1.0
|
CB
|
A:CYS120
|
3.4
|
0.7
|
1.0
|
HB2
|
A:CYS120
|
3.6
|
0.7
|
1.0
|
HB3
|
A:CYS144
|
3.6
|
1.2
|
1.0
|
HB2
|
A:ARG122
|
3.6
|
1.5
|
1.0
|
H
|
A:CYS123
|
3.7
|
0.7
|
1.0
|
H
|
A:HIS141
|
3.7
|
0.4
|
1.0
|
HG1
|
A:THR143
|
4.0
|
2.0
|
1.0
|
HB3
|
A:HIS141
|
4.0
|
0.5
|
1.0
|
NE2
|
A:HIS141
|
4.1
|
0.7
|
1.0
|
HB3
|
A:CYS123
|
4.1
|
0.9
|
1.0
|
CD2
|
A:HIS141
|
4.1
|
0.7
|
1.0
|
N
|
A:CYS123
|
4.2
|
0.8
|
1.0
|
CA
|
A:CYS123
|
4.4
|
0.8
|
1.0
|
N
|
A:HIS141
|
4.4
|
0.3
|
1.0
|
CA
|
A:HIS141
|
4.5
|
0.3
|
1.0
|
H
|
A:CYS144
|
4.6
|
0.6
|
1.0
|
HB3
|
A:LYS125
|
4.6
|
1.1
|
1.0
|
CB
|
A:ARG122
|
4.7
|
1.0
|
1.0
|
CA
|
A:CYS144
|
4.7
|
0.8
|
1.0
|
OG1
|
A:THR143
|
4.7
|
1.4
|
1.0
|
H
|
A:ARG122
|
4.8
|
0.8
|
1.0
|
CA
|
A:CYS120
|
4.9
|
0.7
|
1.0
|
N
|
A:CYS144
|
4.9
|
0.7
|
1.0
|
HA
|
A:CYS123
|
5.0
|
0.9
|
1.0
|
|
Reference:
T.Schallus,
G.Stier,
K.Feher,
C.Muhle-Goll.
Structure of the Muscular Lim Protein Mlp and Its Interaction with Actinin To Be Published.
Page generated: Thu Oct 17 02:25:18 2024
|