Zinc in PDB 2o10: Solution Structure of the N-Terminal Lim Domain of Mlp/CRP3
Zinc Binding Sites:
The binding sites of Zinc atom in the Solution Structure of the N-Terminal Lim Domain of Mlp/CRP3
(pdb code 2o10). This binding sites where shown within
5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the
Solution Structure of the N-Terminal Lim Domain of Mlp/CRP3, PDB code: 2o10:
Jump to Zinc binding site number:
1;
2;
Zinc binding site 1 out
of 2 in 2o10
Go back to
Zinc Binding Sites List in 2o10
Zinc binding site 1 out
of 2 in the Solution Structure of the N-Terminal Lim Domain of Mlp/CRP3
Mono view
Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 1 of Solution Structure of the N-Terminal Lim Domain of Mlp/CRP3 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Zn86
b:0.5
occ:1.00
|
SG
|
A:CYS61
|
2.3
|
0.6
|
1.0
|
SG
|
A:CYS37
|
2.3
|
0.8
|
1.0
|
SG
|
A:CYS40
|
2.3
|
0.7
|
1.0
|
SG
|
A:CYS58
|
2.3
|
0.9
|
1.0
|
H
|
A:CYS40
|
2.7
|
0.6
|
1.0
|
H
|
A:CYS58
|
3.0
|
0.3
|
1.0
|
HB2
|
A:CYS61
|
3.1
|
0.4
|
1.0
|
H
|
A:CYS61
|
3.2
|
0.4
|
1.0
|
HB3
|
A:ALA39
|
3.2
|
1.2
|
1.0
|
HB3
|
A:CYS58
|
3.3
|
0.5
|
1.0
|
HB3
|
A:CYS40
|
3.3
|
0.8
|
1.0
|
CB
|
A:CYS37
|
3.3
|
0.4
|
1.0
|
HB3
|
A:CYS37
|
3.3
|
0.6
|
1.0
|
CB
|
A:CYS61
|
3.3
|
0.5
|
1.0
|
CB
|
A:CYS40
|
3.4
|
0.7
|
1.0
|
CB
|
A:CYS58
|
3.4
|
0.5
|
1.0
|
HB2
|
A:CYS37
|
3.5
|
0.3
|
1.0
|
N
|
A:CYS40
|
3.5
|
0.6
|
1.0
|
H
|
A:ARG41
|
3.8
|
1.0
|
1.0
|
HB
|
A:VAL60
|
3.8
|
0.8
|
1.0
|
HB3
|
A:TYR57
|
3.8
|
0.5
|
1.0
|
HB3
|
A:LYS42
|
3.9
|
0.5
|
1.0
|
N
|
A:CYS58
|
3.9
|
0.3
|
1.0
|
H
|
A:LYS42
|
3.9
|
0.5
|
1.0
|
N
|
A:CYS61
|
3.9
|
0.4
|
1.0
|
CA
|
A:CYS40
|
4.0
|
0.7
|
1.0
|
HB3
|
A:CYS61
|
4.1
|
0.6
|
1.0
|
CA
|
A:CYS58
|
4.2
|
0.3
|
1.0
|
CA
|
A:CYS61
|
4.3
|
0.5
|
1.0
|
H
|
A:ALA39
|
4.3
|
0.6
|
1.0
|
HB2
|
A:CYS58
|
4.3
|
0.8
|
1.0
|
HB2
|
A:CYS40
|
4.3
|
0.8
|
1.0
|
CB
|
A:ALA39
|
4.3
|
0.7
|
1.0
|
HH12
|
A:ARG64
|
4.5
|
2.7
|
1.0
|
HB2
|
A:LYS42
|
4.5
|
0.6
|
1.0
|
C
|
A:ALA39
|
4.5
|
0.7
|
1.0
|
N
|
A:ARG41
|
4.5
|
0.6
|
1.0
|
H
|
A:VAL60
|
4.6
|
0.5
|
1.0
|
CB
|
A:LYS42
|
4.7
|
0.5
|
1.0
|
HB2
|
A:ALA39
|
4.7
|
1.2
|
1.0
|
O
|
A:CYS58
|
4.7
|
0.3
|
1.0
|
C
|
A:CYS58
|
4.7
|
0.3
|
1.0
|
HH22
|
A:ARG64
|
4.7
|
3.5
|
1.0
|
CA
|
A:CYS37
|
4.8
|
0.4
|
1.0
|
CA
|
A:ALA39
|
4.8
|
0.7
|
1.0
|
HA
|
A:CYS61
|
4.8
|
0.5
|
1.0
|
N
|
A:LYS42
|
4.8
|
0.4
|
1.0
|
C
|
A:CYS40
|
4.8
|
0.8
|
1.0
|
CB
|
A:VAL60
|
4.8
|
0.6
|
1.0
|
HD22
|
A:LEU44
|
4.8
|
1.1
|
1.0
|
N
|
A:ALA39
|
4.9
|
0.6
|
1.0
|
HA
|
A:CYS40
|
4.9
|
0.8
|
1.0
|
CB
|
A:TYR57
|
4.9
|
0.4
|
1.0
|
HB1
|
A:ALA39
|
4.9
|
1.3
|
1.0
|
HA
|
A:TYR57
|
4.9
|
0.3
|
1.0
|
|
Zinc binding site 2 out
of 2 in 2o10
Go back to
Zinc Binding Sites List in 2o10
Zinc binding site 2 out
of 2 in the Solution Structure of the N-Terminal Lim Domain of Mlp/CRP3
Mono view
Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 2 of Solution Structure of the N-Terminal Lim Domain of Mlp/CRP3 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Zn87
b:0.4
occ:1.00
|
ND1
|
A:HIS31
|
2.0
|
0.4
|
1.0
|
SG
|
A:CYS10
|
2.3
|
0.4
|
1.0
|
SG
|
A:CYS13
|
2.3
|
0.6
|
1.0
|
SG
|
A:CYS34
|
2.3
|
0.6
|
1.0
|
HB2
|
A:HIS31
|
2.7
|
0.4
|
1.0
|
CE1
|
A:HIS31
|
3.0
|
0.4
|
1.0
|
CG
|
A:HIS31
|
3.0
|
0.3
|
1.0
|
H
|
A:CYS13
|
3.2
|
0.5
|
1.0
|
HB2
|
A:CYS13
|
3.2
|
0.8
|
1.0
|
HB2
|
A:CYS10
|
3.2
|
0.4
|
1.0
|
HE1
|
A:HIS31
|
3.2
|
0.5
|
1.0
|
HB2
|
A:CYS34
|
3.3
|
0.6
|
1.0
|
CB
|
A:CYS10
|
3.3
|
0.4
|
1.0
|
CB
|
A:HIS31
|
3.3
|
0.3
|
1.0
|
CB
|
A:CYS13
|
3.4
|
0.6
|
1.0
|
CB
|
A:CYS34
|
3.4
|
0.5
|
1.0
|
HB3
|
A:ALA12
|
3.5
|
1.3
|
1.0
|
H
|
A:HIS31
|
3.6
|
0.3
|
1.0
|
HB3
|
A:CYS10
|
3.6
|
0.5
|
1.0
|
HB3
|
A:CYS34
|
3.7
|
0.6
|
1.0
|
N
|
A:CYS13
|
3.9
|
0.6
|
1.0
|
HB3
|
A:HIS31
|
4.0
|
0.4
|
1.0
|
NE2
|
A:HIS31
|
4.0
|
0.5
|
1.0
|
CD2
|
A:HIS31
|
4.1
|
0.5
|
1.0
|
HB3
|
A:CYS13
|
4.2
|
0.9
|
1.0
|
CA
|
A:CYS13
|
4.2
|
0.6
|
1.0
|
N
|
A:HIS31
|
4.3
|
0.3
|
1.0
|
HZ3
|
A:LYS15
|
4.3
|
2.8
|
1.0
|
HD2
|
A:LYS15
|
4.4
|
1.9
|
1.0
|
HG21
|
A:VAL17
|
4.4
|
1.1
|
1.0
|
CA
|
A:HIS31
|
4.4
|
0.3
|
1.0
|
H
|
A:ALA12
|
4.5
|
0.6
|
1.0
|
CB
|
A:ALA12
|
4.6
|
0.7
|
1.0
|
HB2
|
A:LYS15
|
4.6
|
0.6
|
1.0
|
CA
|
A:CYS10
|
4.7
|
0.4
|
1.0
|
CA
|
A:CYS34
|
4.8
|
0.5
|
1.0
|
HA
|
A:CYS13
|
4.8
|
0.7
|
1.0
|
HA
|
A:CYS10
|
4.8
|
0.4
|
1.0
|
HE2
|
A:HIS31
|
4.9
|
0.7
|
1.0
|
HG23
|
A:VAL17
|
4.9
|
1.1
|
1.0
|
C
|
A:ALA12
|
5.0
|
0.8
|
1.0
|
N
|
A:CYS34
|
5.0
|
0.5
|
1.0
|
|
Reference:
T.Schallus,
G.Stier,
K.Feher,
C.Muhle-Goll.
Structure of the Muscular Lim Protein Mlp and Its Interaction with Actinin To Be Published.
Page generated: Thu Oct 17 02:25:16 2024
|