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Zinc in PDB 2o10: Solution Structure of the N-Terminal Lim Domain of Mlp/CRP3

Zinc Binding Sites:

The binding sites of Zinc atom in the Solution Structure of the N-Terminal Lim Domain of Mlp/CRP3 (pdb code 2o10). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Solution Structure of the N-Terminal Lim Domain of Mlp/CRP3, PDB code: 2o10:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 2o10

Go back to Zinc Binding Sites List in 2o10
Zinc binding site 1 out of 2 in the Solution Structure of the N-Terminal Lim Domain of Mlp/CRP3


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Solution Structure of the N-Terminal Lim Domain of Mlp/CRP3 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn86

b:0.5
occ:1.00
SG A:CYS61 2.3 0.6 1.0
SG A:CYS37 2.3 0.8 1.0
SG A:CYS40 2.3 0.7 1.0
SG A:CYS58 2.3 0.9 1.0
H A:CYS40 2.7 0.6 1.0
H A:CYS58 3.0 0.3 1.0
HB2 A:CYS61 3.1 0.4 1.0
H A:CYS61 3.2 0.4 1.0
HB3 A:ALA39 3.2 1.2 1.0
HB3 A:CYS58 3.3 0.5 1.0
HB3 A:CYS40 3.3 0.8 1.0
CB A:CYS37 3.3 0.4 1.0
HB3 A:CYS37 3.3 0.6 1.0
CB A:CYS61 3.3 0.5 1.0
CB A:CYS40 3.4 0.7 1.0
CB A:CYS58 3.4 0.5 1.0
HB2 A:CYS37 3.5 0.3 1.0
N A:CYS40 3.5 0.6 1.0
H A:ARG41 3.8 1.0 1.0
HB A:VAL60 3.8 0.8 1.0
HB3 A:TYR57 3.8 0.5 1.0
HB3 A:LYS42 3.9 0.5 1.0
N A:CYS58 3.9 0.3 1.0
H A:LYS42 3.9 0.5 1.0
N A:CYS61 3.9 0.4 1.0
CA A:CYS40 4.0 0.7 1.0
HB3 A:CYS61 4.1 0.6 1.0
CA A:CYS58 4.2 0.3 1.0
CA A:CYS61 4.3 0.5 1.0
H A:ALA39 4.3 0.6 1.0
HB2 A:CYS58 4.3 0.8 1.0
HB2 A:CYS40 4.3 0.8 1.0
CB A:ALA39 4.3 0.7 1.0
HH12 A:ARG64 4.5 2.7 1.0
HB2 A:LYS42 4.5 0.6 1.0
C A:ALA39 4.5 0.7 1.0
N A:ARG41 4.5 0.6 1.0
H A:VAL60 4.6 0.5 1.0
CB A:LYS42 4.7 0.5 1.0
HB2 A:ALA39 4.7 1.2 1.0
O A:CYS58 4.7 0.3 1.0
C A:CYS58 4.7 0.3 1.0
HH22 A:ARG64 4.7 3.5 1.0
CA A:CYS37 4.8 0.4 1.0
CA A:ALA39 4.8 0.7 1.0
HA A:CYS61 4.8 0.5 1.0
N A:LYS42 4.8 0.4 1.0
C A:CYS40 4.8 0.8 1.0
CB A:VAL60 4.8 0.6 1.0
HD22 A:LEU44 4.8 1.1 1.0
N A:ALA39 4.9 0.6 1.0
HA A:CYS40 4.9 0.8 1.0
CB A:TYR57 4.9 0.4 1.0
HB1 A:ALA39 4.9 1.3 1.0
HA A:TYR57 4.9 0.3 1.0

Zinc binding site 2 out of 2 in 2o10

Go back to Zinc Binding Sites List in 2o10
Zinc binding site 2 out of 2 in the Solution Structure of the N-Terminal Lim Domain of Mlp/CRP3


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Solution Structure of the N-Terminal Lim Domain of Mlp/CRP3 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn87

b:0.4
occ:1.00
ND1 A:HIS31 2.0 0.4 1.0
SG A:CYS10 2.3 0.4 1.0
SG A:CYS13 2.3 0.6 1.0
SG A:CYS34 2.3 0.6 1.0
HB2 A:HIS31 2.7 0.4 1.0
CE1 A:HIS31 3.0 0.4 1.0
CG A:HIS31 3.0 0.3 1.0
H A:CYS13 3.2 0.5 1.0
HB2 A:CYS13 3.2 0.8 1.0
HB2 A:CYS10 3.2 0.4 1.0
HE1 A:HIS31 3.2 0.5 1.0
HB2 A:CYS34 3.3 0.6 1.0
CB A:CYS10 3.3 0.4 1.0
CB A:HIS31 3.3 0.3 1.0
CB A:CYS13 3.4 0.6 1.0
CB A:CYS34 3.4 0.5 1.0
HB3 A:ALA12 3.5 1.3 1.0
H A:HIS31 3.6 0.3 1.0
HB3 A:CYS10 3.6 0.5 1.0
HB3 A:CYS34 3.7 0.6 1.0
N A:CYS13 3.9 0.6 1.0
HB3 A:HIS31 4.0 0.4 1.0
NE2 A:HIS31 4.0 0.5 1.0
CD2 A:HIS31 4.1 0.5 1.0
HB3 A:CYS13 4.2 0.9 1.0
CA A:CYS13 4.2 0.6 1.0
N A:HIS31 4.3 0.3 1.0
HZ3 A:LYS15 4.3 2.8 1.0
HD2 A:LYS15 4.4 1.9 1.0
HG21 A:VAL17 4.4 1.1 1.0
CA A:HIS31 4.4 0.3 1.0
H A:ALA12 4.5 0.6 1.0
CB A:ALA12 4.6 0.7 1.0
HB2 A:LYS15 4.6 0.6 1.0
CA A:CYS10 4.7 0.4 1.0
CA A:CYS34 4.8 0.5 1.0
HA A:CYS13 4.8 0.7 1.0
HA A:CYS10 4.8 0.4 1.0
HE2 A:HIS31 4.9 0.7 1.0
HG23 A:VAL17 4.9 1.1 1.0
C A:ALA12 5.0 0.8 1.0
N A:CYS34 5.0 0.5 1.0

Reference:

T.Schallus, G.Stier, K.Feher, C.Muhle-Goll. Structure of the Muscular Lim Protein Mlp and Its Interaction with Actinin To Be Published.
Page generated: Thu Oct 17 02:25:16 2024

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