Zinc binding site 1 out of 8 in 2nvz
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 Click to enlarge |  Click to enlarge | Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 1 of Zinc in the PDB 2nvz. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Zinc atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: Cys107, A: Met108, A: His109, A: Cys110, A: Gly111, A: Cys148, A: Cys167, |
conact list:
Atom | Atom | Distance (A) | Zn | O A:Cys107 | 4.39 | Zn | C A:Cys107 | 5.00 | Zn | CB A:Met108 | 3.08 | Zn | CE A:Met108 | 4.25 | Zn | C A:Met108 | 4.92 | Zn | CG A:Met108 | 3.21 | Zn | SD A:Met108 | 2.96 | Zn | CA A:Met108 | 4.49 | Zn | N A:His109 | 4.87 | Zn | N A:Cys110 | 4.18 | Zn | CB A:Cys110 | 3.48 | Zn | SG A:Cys110 | 2.35 | Zn | C A:Cys110 | 4.76 | Zn | CA A:Cys110 | 4.29 | Zn | N A:Gly111 | 4.35 | Zn | SG A:Cys148 | 4.96 | Zn | CB A:Cys167 | 3.35 | Zn | SG A:Cys167 | 2.34 | Zn | CA A:Cys167 | 4.77 |
| interactive model:
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Zinc binding site 2 out of 8 in 2nvz
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 Click to enlarge |  Click to enlarge | Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 2 of Zinc in the PDB 2nvz. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Zinc atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: Gly59, A: Cys67, A: Gln68, A: Cys70, A: Cys77, A: Pro78, A: Gly79, A: His80, |
conact list:
Atom | Atom | Distance (A) | Zn | N A:Gly59 | 4.98 | Zn | CA A:Gly59 | 4.73 | Zn | CB A:Cys67 | 3.50 | Zn | SG A:Cys67 | 2.35 | Zn | CA A:Cys67 | 4.88 | Zn | NE2 A:Gln68 | 4.76 | Zn | OE1 A:Gln68 | 3.75 | Zn | CD A:Gln68 | 4.66 | Zn | CB A:Cys70 | 3.24 | Zn | SG A:Cys70 | 2.34 | Zn | CA A:Cys70 | 4.72 | Zn | O A:Cys77 | 4.24 | Zn | CB A:Cys77 | 2.75 | Zn | SG A:Cys77 | 1.03 | Zn | C A:Cys77 | 4.01 | Zn | CA A:Cys77 | 3.79 | Zn | N A:Pro78 | 4.59 | Zn | CD A:Pro78 | 4.73 | Zn | N A:Gly79 | 4.59 | Zn | NE2 A:His80 | 2.37 | Zn | ND1 A:His80 | 3.82 | Zn | CD2 A:His80 | 3.69 | Zn | CE1 A:His80 | 2.54 | Zn | CG A:His80 | 4.40 |
| interactive model:
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Zinc binding site 3 out of 8 in 2nvz
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 Click to enlarge |  Click to enlarge | Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 3 of Zinc in the PDB 2nvz. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Zinc atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: Ile30, B: Cys1163, B: Cys1166, B: Cys1182, B: Lys1183, B: Cys1185, |
conact list:
Atom | Atom | Distance (A) | Zn | CD1 A:Ile30 | 4.41 | Zn | CB B:Cys1163 | 3.73 | Zn | SG B:Cys1163 | 3.22 | Zn | O B:Cys1166 | 4.06 | Zn | N B:Cys1166 | 4.70 | Zn | CB B:Cys1166 | 3.37 | Zn | SG B:Cys1166 | 2.33 | Zn | C B:Cys1166 | 4.71 | Zn | CA B:Cys1166 | 4.46 | Zn | O B:Cys1182 | 4.76 | Zn | CB B:Cys1182 | 3.53 | Zn | SG B:Cys1182 | 2.35 | Zn | C B:Cys1182 | 4.93 | Zn | CA B:Cys1182 | 4.80 | Zn | O B:Lys1183 | 4.75 | Zn | N B:Cys1185 | 4.47 | Zn | CB B:Cys1185 | 2.96 | Zn | SG B:Cys1185 | 2.52 | Zn | CA B:Cys1185 | 4.30 |
| interactive model:
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Zinc binding site 4 out of 8 in 2nvz
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 Click to enlarge |  Click to enlarge | Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 4 of Zinc in the PDB 2nvz. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Zinc atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: C: Cys86, C: Phe87, C: Cys88, C: Asp90, C: His91, C: Cys92, C: Cys95, |
conact list:
Atom | Atom | Distance (A) | Zn | CB C:Cys86 | 3.36 | Zn | SG C:Cys86 | 2.35 | Zn | C C:Cys86 | 4.80 | Zn | CA C:Cys86 | 4.67 | Zn | N C:Phe87 | 4.77 | Zn | N C:Cys88 | 4.11 | Zn | CB C:Cys88 | 3.42 | Zn | SG C:Cys88 | 2.34 | Zn | C C:Cys88 | 4.88 | Zn | CA C:Cys88 | 4.30 | Zn | O C:Asp90 | 4.59 | Zn | C C:Asp90 | 4.97 | Zn | O C:His91 | 4.77 | Zn | N C:His91 | 4.72 | Zn | C C:His91 | 3.89 | Zn | CA C:His91 | 4.05 | Zn | N C:Cys92 | 3.33 | Zn | CB C:Cys92 | 3.34 | Zn | SG C:Cys92 | 2.34 | Zn | C C:Cys92 | 4.83 | Zn | CA C:Cys92 | 3.93 | Zn | N C:Cys95 | 4.79 | Zn | CB C:Cys95 | 3.33 | Zn | SG C:Cys95 | 2.34 | Zn | CA C:Cys95 | 4.63 |
| interactive model:
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Zinc binding site 5 out of 8 in 2nvz
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 Click to enlarge |  Click to enlarge | Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 5 of Zinc in the PDB 2nvz. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Zinc atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: I: Cys7, I: Cys10, I: Cys29, I: Arg30, I: Cys32, I: Ser33, |
conact list:
Atom | Atom | Distance (A) | Zn | CB I:Cys7 | 4.68 | Zn | SG I:Cys7 | 3.85 | Zn | CB I:Cys10 | 3.35 | Zn | SG I:Cys10 | 2.33 | Zn | CA I:Cys10 | 4.71 | Zn | CB I:Cys29 | 3.36 | Zn | SG I:Cys29 | 2.33 | Zn | CA I:Cys29 | 4.70 | Zn | N I:Arg30 | 4.28 | Zn | CB I:Arg30 | 4.92 | Zn | CD I:Arg30 | 4.32 | Zn | CG I:Arg30 | 3.63 | Zn | O I:Cys32 | 4.05 | Zn | N I:Cys32 | 4.42 | Zn | CB I:Cys32 | 3.46 | Zn | SG I:Cys32 | 2.34 | Zn | C I:Cys32 | 4.20 | Zn | CA I:Cys32 | 4.22 | Zn | N I:Ser33 | 4.94 |
| interactive model:
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Zinc binding site 6 out of 8 in 2nvz
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 Click to enlarge |  Click to enlarge | Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 6 of Zinc in the PDB 2nvz. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Zinc atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: I: Cys75, I: Cys78, I: His79, I: Ser80, I: Cys103, I: Ser105, I: Cys106, I: His108, |
conact list:
Atom | Atom | Distance (A) | Zn | O I:Cys75 | 4.83 | Zn | CB I:Cys75 | 3.34 | Zn | SG I:Cys75 | 2.34 | Zn | C I:Cys75 | 4.97 | Zn | CA I:Cys75 | 4.70 | Zn | O I:Cys78 | 2.78 | Zn | N I:Cys78 | 4.23 | Zn | CB I:Cys78 | 3.38 | Zn | SG I:Cys78 | 2.33 | Zn | C I:Cys78 | 3.52 | Zn | CA I:Cys78 | 3.90 | Zn | N I:His79 | 4.54 | Zn | O I:Ser80 | 4.75 | Zn | CB I:Ser80 | 3.27 | Zn | OG I:Ser80 | 2.97 | Zn | CA I:Ser80 | 4.71 | Zn | CB I:Cys103 | 3.26 | Zn | SG I:Cys103 | 2.32 | Zn | CA I:Cys103 | 4.51 | Zn | CB I:Ser105 | 4.66 | Zn | C I:Ser105 | 4.99 | Zn | N I:Cys106 | 4.63 | Zn | CB I:Cys106 | 3.49 | Zn | SG I:Cys106 | 2.34 | Zn | CA I:Cys106 | 4.71 | Zn | NE2 I:His108 | 4.61 | Zn | CD2 I:His108 | 4.28 |
| interactive model:
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Zinc binding site 7 out of 8 in 2nvz
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 Click to enlarge |  Click to enlarge | Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 7 of Zinc in the PDB 2nvz. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Zinc atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: J: Cys7, J: Phe8, J: Ser9, J: Cys10, J: Gly11, J: Cys45, J: Cys46, |
conact list:
Atom | Atom | Distance (A) | Zn | O J:Cys7 | 3.63 | Zn | CB J:Cys7 | 3.46 | Zn | SG J:Cys7 | 2.15 | Zn | C J:Cys7 | 4.11 | Zn | CA J:Cys7 | 4.42 | Zn | N J:Phe8 | 4.91 | Zn | C J:Phe8 | 4.84 | Zn | O J:Ser9 | 4.70 | Zn | N J:Ser9 | 3.80 | Zn | CB J:Ser9 | 3.50 | Zn | OG J:Ser9 | 3.23 | Zn | C J:Ser9 | 3.55 | Zn | CA J:Ser9 | 3.74 | Zn | N J:Cys10 | 2.55 | Zn | CB J:Cys10 | 3.14 | Zn | SG J:Cys10 | 2.32 | Zn | C J:Cys10 | 4.17 | Zn | CA J:Cys10 | 3.32 | Zn | N J:Gly11 | 4.03 | Zn | O J:Cys45 | 3.47 | Zn | CB J:Cys45 | 3.45 | Zn | SG J:Cys45 | 2.35 | Zn | C J:Cys45 | 3.30 | Zn | CA J:Cys45 | 4.00 | Zn | N J:Cys46 | 3.32 | Zn | CB J:Cys46 | 3.30 | Zn | SG J:Cys46 | 2.35 | Zn | C J:Cys46 | 4.89 | Zn | CA J:Cys46 | 3.38 |
| interactive model:
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Zinc binding site 8 out of 8 in 2nvz
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 Click to enlarge |  Click to enlarge | Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 8 of Zinc in the PDB 2nvz. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Zinc atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: L: Cys31, L: Glu33, L: Cys34, L: Cys48, L: Lys49, L: Cys51, |
conact list:
Atom | Atom | Distance (A) | Zn | CB L:Cys31 | 3.62 | Zn | SG L:Cys31 | 3.01 | Zn | O L:Glu33 | 4.32 | Zn | OE2 L:Glu33 | 4.85 | Zn | O L:Cys34 | 3.91 | Zn | CB L:Cys34 | 3.53 | Zn | SG L:Cys34 | 2.35 | Zn | C L:Cys34 | 4.64 | Zn | CA L:Cys34 | 4.60 | Zn | CB L:Cys48 | 2.97 | Zn | SG L:Cys48 | 1.91 | Zn | C L:Cys48 | 4.79 | Zn | CA L:Cys48 | 4.35 | Zn | N L:Lys49 | 4.76 | Zn | CB L:Cys51 | 3.41 | Zn | SG L:Cys51 | 2.34 | Zn | CA L:Cys51 | 4.74 |
| interactive model:
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