Zinc in PDB 2nr6: Crystal Structure of the Complex of Antibody and the Allergen Bla G 2

The structure of Crystal Structure of the Complex of Antibody and the Allergen Bla G 2, PDB code: 2nr6 was solved by M.Li, A.Gustchina, A.Wlodawer, A.Pomes, S.Wunschmann, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	50.00 / 2.81
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	77.004, 103.187, 146.329, 90.00, 94.83, 90.00
R / Rfree (%)	23.2 / 28.1

The binding sites of Zinc atom in the Crystal Structure of the Complex of Antibody and the Allergen Bla G 2 (pdb code 2nr6). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Crystal Structure of the Complex of Antibody and the Allergen Bla G 2, PDB code: 2nr6:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the Crystal Structure of the Complex of Antibody and the Allergen Bla G 2


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of the Complex of Antibody and the Allergen Bla G 2 within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn602 b:15.0 occ:1.00 OD1 A:ASP303 1.8 15.0 1.0 NE2 A:HIS161 1.9 15.0 1.0 OD1 A:ASP307 2.0 15.0 1.0 ND1 A:HIS155 2.1 15.0 1.0 CG A:ASP303 2.6 15.0 1.0 OD2 A:ASP303 2.8 15.0 1.0 CE1 A:HIS161 2.8 15.0 1.0 CG A:ASP307 2.9 15.0 1.0 CD2 A:HIS161 2.9 15.0 1.0 CE1 A:HIS155 2.9 15.0 1.0 OD2 A:ASP307 3.1 15.0 1.0 CG A:HIS155 3.1 15.0 1.0 CB A:HIS155 3.5 15.0 1.0 OH A:TYR14 3.8 15.0 1.0 ND1 A:HIS161 4.0 15.0 1.0 CG A:HIS161 4.0 15.0 1.0 CB A:ASP303 4.1 15.0 1.0 NE2 A:HIS155 4.1 15.0 1.0 CD2 A:HIS155 4.2 15.0 1.0 O A:ASP303 4.3 15.0 1.0 CB A:ASP307 4.3 15.0 1.0 N A:ALA156 4.3 15.0 1.0 CE1 A:TYR14 4.5 15.0 1.0 CZ A:TYR14 4.5 15.0 1.0 C A:HIS155 4.5 15.0 1.0 C A:ASP303 4.6 15.0 1.0 CA A:HIS155 4.6 15.0 1.0 CA A:ASP307 4.7 15.0 1.0 CA A:ASP303 4.7 15.0 1.0 NE A:ARG157 4.8 15.0 1.0 O A:ALA156 4.8 15.0 1.0 CG A:ARG157 4.8 15.0 1.0 C A:ALA156 4.9 15.0 1.0 N A:ASP307 4.9 15.0 1.0 CA A:ALA156 4.9 15.0 1.0

Zinc binding site 2 out of 2 in the Crystal Structure of the Complex of Antibody and the Allergen Bla G 2


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Crystal Structure of the Complex of Antibody and the Allergen Bla G 2 within 5.0Å range: probe atom residue distance (Å) B Occ B:Zn602 b:15.0 occ:1.00 OD1 B:ASP303 1.9 15.0 1.0 NE2 B:HIS161 2.0 15.0 1.0 OD1 B:ASP307 2.0 15.0 1.0 ND1 B:HIS155 2.0 15.0 1.0 CG B:ASP303 2.7 15.0 1.0 CE1 B:HIS155 2.8 15.0 1.0 OD2 B:ASP303 2.9 15.0 1.0 CE1 B:HIS161 2.9 15.0 1.0 CG B:ASP307 2.9 15.0 1.0 CD2 B:HIS161 3.0 15.0 1.0 CG B:HIS155 3.2 15.0 1.0 OD2 B:ASP307 3.2 15.0 1.0 OH B:TYR14 3.7 15.0 1.0 CB B:HIS155 3.7 15.0 1.0 NE2 B:HIS155 4.0 15.0 1.0 ND1 B:HIS161 4.0 15.0 1.0 CG B:HIS161 4.1 15.0 1.0 CB B:ASP303 4.2 15.0 1.0 CD2 B:HIS155 4.2 15.0 1.0 O B:ASP303 4.3 15.0 1.0 CB B:ASP307 4.3 15.0 1.0 C B:HIS155 4.4 15.0 1.0 CZ B:TYR14 4.4 15.0 1.0 N B:ALA156 4.4 15.0 1.0 CE1 B:TYR14 4.6 15.0 1.0 CA B:ASP307 4.6 15.0 1.0 CA B:HIS155 4.6 15.0 1.0 O B:HIS155 4.7 15.0 1.0 C B:ASP303 4.7 15.0 1.0 CA B:ASP303 4.8 15.0 1.0 NH2 B:ARG157 4.8 15.0 1.0 N B:ASP307 4.8 15.0 1.0 C B:ALA156 4.8 15.0 1.0 CA B:ALA156 4.9 15.0 1.0

M.Li, A.Gustchina, J.Alexandratos, A.Wlodawer, S.Wunschmann, C.L.Kepley, M.D.Chapman, A.Pomes. Crystal Structure of A Dimerized Cockroach Allergen Bla G 2 Complexed with A Monoclonal Antibody. J.Biol.Chem. V. 283 22806 2008.
ISSN: ISSN 0021-9258
PubMed: 18519566
DOI: 10.1074/JBC.M800937200