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Zinc in PDB 2nly: Crystal Structure of Protein BH1492 From Bacillus Halodurans, Pfam DUF610

Protein crystallography data

The structure of Crystal Structure of Protein BH1492 From Bacillus Halodurans, Pfam DUF610, PDB code: 2nly was solved by X.Jin, J.M.Sauder, S.Wasserman, D.Smith, S.K.Burley, L.Shapiro, New Yorksgx Research Center For Structural Genomics (Nysgxrc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 2.50
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 81.153, 113.517, 63.532, 90.00, 90.00, 90.00
R / Rfree (%) 22.2 / 27.3

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of Protein BH1492 From Bacillus Halodurans, Pfam DUF610 (pdb code 2nly). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of Protein BH1492 From Bacillus Halodurans, Pfam DUF610, PDB code: 2nly:

Zinc binding site 1 out of 1 in 2nly

Go back to Zinc Binding Sites List in 2nly
Zinc binding site 1 out of 1 in the Crystal Structure of Protein BH1492 From Bacillus Halodurans, Pfam DUF610


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of Protein BH1492 From Bacillus Halodurans, Pfam DUF610 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn300

b:59.9
occ:1.00
NE2 A:HIS86 2.2 36.1 1.0
ND1 A:HIS133 2.2 48.3 1.0
OD1 A:ASP40 2.3 44.2 1.0
O A:HOH427 2.6 32.1 1.0
CE1 A:HIS86 2.9 34.9 1.0
CE1 A:HIS133 2.9 49.1 1.0
CG A:ASP40 3.2 39.5 1.0
CD2 A:HIS86 3.3 35.1 1.0
CG A:HIS133 3.4 46.3 1.0
OD2 A:ASP40 3.5 41.1 1.0
CB A:HIS133 3.9 46.3 1.0
CB A:ASP39 3.9 36.1 1.0
OD2 A:ASP39 3.9 39.9 1.0
CA A:HIS133 4.0 46.2 1.0
ND1 A:HIS86 4.1 34.9 1.0
NE2 A:HIS133 4.1 49.0 1.0
CD2 A:HIS220 4.2 37.0 1.0
NE2 A:HIS220 4.3 39.1 1.0
CG A:ASP39 4.3 37.9 1.0
CG A:HIS86 4.3 34.1 1.0
CD2 A:HIS133 4.4 47.8 1.0
CB A:ASP40 4.5 36.3 1.0
N A:ASP40 4.6 35.5 1.0
N A:MET134 4.7 48.0 1.0
C A:HIS133 4.8 46.8 1.0
CA A:ASP40 4.8 35.6 1.0

Reference:

X.Jin, J.M.Sauder, S.Wasserman, D.Smith, S.K.Burley, L.Shapiro. Crystal Structure of Hypothetical Protein BH1492 From Bacillus Halodurans C-125 To Be Published.
Page generated: Wed Dec 16 03:43:33 2020

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