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Zinc in PDB 2nax: Structure of Cchc Zinc Finger Domain of PCF11

Zinc Binding Sites:

The binding sites of Zinc atom in the Structure of Cchc Zinc Finger Domain of PCF11 (pdb code 2nax). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Structure of Cchc Zinc Finger Domain of PCF11, PDB code: 2nax:

Zinc binding site 1 out of 1 in 2nax

Go back to Zinc Binding Sites List in 2nax
Zinc binding site 1 out of 1 in the Structure of Cchc Zinc Finger Domain of PCF11


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Structure of Cchc Zinc Finger Domain of PCF11 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn701

b:0.0
occ:1.00
ND1 A:HIS596 2.2 0.0 1.0
SG A:CYS567 2.3 0.0 1.0
SG A:CYS564 2.4 0.0 1.0
SG A:CYS599 2.4 0.0 1.0
HB2 A:HIS596 2.9 0.0 1.0
H A:CYS567 3.1 0.0 1.0
CE1 A:HIS596 3.1 0.0 1.0
HB3 A:CYS564 3.2 0.0 1.0
HB3 A:CYS567 3.2 0.0 1.0
CB A:CYS564 3.2 0.0 1.0
CG A:HIS596 3.3 0.0 1.0
HE1 A:HIS596 3.3 0.0 1.0
CB A:CYS567 3.4 0.0 1.0
CB A:CYS599 3.4 0.0 1.0
HB2 A:CYS599 3.4 0.0 1.0
HB2 A:CYS564 3.4 0.0 1.0
HB3 A:CYS599 3.5 0.0 1.0
CB A:HIS596 3.6 0.0 1.0
HB A:ILE566 3.6 0.0 1.0
H A:HIS596 3.9 0.0 1.0
N A:CYS567 3.9 0.0 1.0
HB2 A:GLU569 4.0 0.0 1.0
HB3 A:HIS596 4.2 0.0 1.0
CA A:CYS567 4.2 0.0 1.0
HB2 A:CYS567 4.2 0.0 1.0
NE2 A:HIS596 4.3 0.0 1.0
CD2 A:HIS596 4.4 0.0 1.0
H A:GLU569 4.5 0.0 1.0
N A:HIS596 4.6 0.0 1.0
CB A:ILE566 4.6 0.0 1.0
HG23 A:ILE566 4.6 0.0 1.0
CA A:CYS564 4.7 0.0 1.0
H A:ILE566 4.7 0.0 1.0
CA A:HIS596 4.7 0.0 1.0
H A:CYS599 4.8 0.0 1.0
CA A:CYS599 4.8 0.0 1.0
H A:LYS568 4.9 0.0 1.0
C A:ILE566 4.9 0.0 1.0
HD12 A:ILE566 5.0 0.0 1.0
C A:CYS567 5.0 0.0 1.0

Reference:

F.Yang, P.Hsu, S.D.Lee, W.Yang, D.Hoskinson, W.Xu, C.Moore, G.Varani. The C Terminus of PCF11 Forms A Novel Zinc-Finger Structure That Plays An Essential Role in Mrna 3'-End Processing. Rna V. 23 98 2017.
ISSN: ESSN 1469-9001
PubMed: 27780845
DOI: 10.1261/RNA.058354.116
Page generated: Thu Oct 17 02:13:27 2024

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