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Zinc in PDB 2nab: NIZP1-C2HR Zinc Finger Structure

Zinc Binding Sites:

The binding sites of Zinc atom in the NIZP1-C2HR Zinc Finger Structure (pdb code 2nab). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the NIZP1-C2HR Zinc Finger Structure, PDB code: 2nab:

Zinc binding site 1 out of 1 in 2nab

Go back to Zinc Binding Sites List in 2nab
Zinc binding site 1 out of 1 in the NIZP1-C2HR Zinc Finger Structure


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of NIZP1-C2HR Zinc Finger Structure within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn101

b:0.6
occ:1.00
NE2 A:HIS30 2.0 0.4 1.0
SG A:CYS17 2.3 0.8 1.0
SG A:CYS14 2.3 0.6 1.0
CE1 A:HIS30 2.6 0.4 1.0
HE1 A:HIS30 2.9 0.5 1.0
CD2 A:HIS30 2.9 0.3 1.0
HB2 A:CYS17 3.1 0.9 1.0
CB A:CYS17 3.4 0.5 1.0
CB A:CYS14 3.4 0.3 1.0
HD2 A:HIS30 3.4 0.3 1.0
HB3 A:CYS14 3.4 0.4 1.0
HB2 A:CYS14 3.5 0.4 1.0
ND1 A:HIS30 3.6 0.3 1.0
H A:CYS17 3.7 0.3 1.0
CG A:HIS30 3.7 0.2 1.0
HB3 A:ASN16 3.9 0.7 1.0
HB3 A:CYS17 4.1 0.7 1.0
OE1 A:GLN37 4.1 8.1 1.0
N A:CYS17 4.2 0.3 1.0
HD21 A:LEU31 4.2 1.1 1.0
O A:HIS30 4.4 0.3 1.0
HD1 A:HIS30 4.4 0.3 1.0
HG2 A:ARG34 4.4 1.8 1.0
CA A:CYS17 4.4 0.3 1.0
HB3 A:LYS19 4.5 0.3 1.0
HA A:LEU31 4.7 0.3 1.0
H A:ASN16 4.7 0.4 1.0
HE1 A:PHE21 4.8 0.7 1.0
HB2 A:LYS19 4.8 0.3 1.0
HD11 A:LEU31 4.8 1.2 1.0
CA A:CYS14 4.8 0.2 1.0
HG3 A:ARG34 4.9 1.5 1.0
C A:HIS30 5.0 0.2 1.0

Reference:

A.Berardi, G.Quilici, D.Spiliotopoulos, M.A.Corral-Rodriguez, F.Martin-Garcia, M.Degano, G.Tonon, M.Ghitti, G.Musco. Structural Basis For PHDVC5HCHNSD1-C2HRNIZP1 Interaction: Implications For Sotos Syndrome. Nucleic Acids Res. V. 44 3448 2016.
ISSN: ISSN 0305-1048
PubMed: 26896805
DOI: 10.1093/NAR/GKW103
Page generated: Wed Dec 16 03:43:17 2020

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