Zinc in PDB 2egp: Solution Structure of the Ring-Finger Domain From Human Tripartite Motif Protein 34
Zinc Binding Sites:
The binding sites of Zinc atom in the Solution Structure of the Ring-Finger Domain From Human Tripartite Motif Protein 34
(pdb code 2egp). This binding sites where shown within
5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the
Solution Structure of the Ring-Finger Domain From Human Tripartite Motif Protein 34, PDB code: 2egp:
Jump to Zinc binding site number:
1;
2;
Zinc binding site 1 out
of 2 in 2egp
Go back to
Zinc Binding Sites List in 2egp
Zinc binding site 1 out
of 2 in the Solution Structure of the Ring-Finger Domain From Human Tripartite Motif Protein 34
Mono view
Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 1 of Solution Structure of the Ring-Finger Domain From Human Tripartite Motif Protein 34 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Zn200
b:0.0
occ:1.00
|
SG
|
A:CYS35
|
2.3
|
0.0
|
1.0
|
SG
|
A:CYS38
|
2.3
|
0.0
|
1.0
|
SG
|
A:CYS18
|
2.3
|
0.0
|
1.0
|
SG
|
A:CYS15
|
2.3
|
0.0
|
1.0
|
HB3
|
A:CYS15
|
2.8
|
0.0
|
1.0
|
CB
|
A:CYS15
|
2.9
|
0.0
|
1.0
|
HB2
|
A:CYS35
|
2.9
|
0.0
|
1.0
|
HB2
|
A:CYS15
|
3.0
|
0.0
|
1.0
|
HB3
|
A:CYS18
|
3.1
|
0.0
|
1.0
|
H
|
A:CYS18
|
3.1
|
0.0
|
1.0
|
CB
|
A:CYS35
|
3.2
|
0.0
|
1.0
|
H
|
A:CYS35
|
3.3
|
0.0
|
1.0
|
CB
|
A:CYS18
|
3.3
|
0.0
|
1.0
|
HB2
|
A:CYS38
|
3.6
|
0.0
|
1.0
|
CB
|
A:CYS38
|
3.6
|
0.0
|
1.0
|
HB
|
A:ILE17
|
3.8
|
0.0
|
1.0
|
N
|
A:CYS18
|
4.0
|
0.0
|
1.0
|
HB3
|
A:CYS35
|
4.0
|
0.0
|
1.0
|
HB3
|
A:CYS38
|
4.1
|
0.0
|
1.0
|
N
|
A:CYS35
|
4.1
|
0.0
|
1.0
|
HB2
|
A:CYS18
|
4.1
|
0.0
|
1.0
|
CA
|
A:CYS18
|
4.3
|
0.0
|
1.0
|
CA
|
A:CYS35
|
4.3
|
0.0
|
1.0
|
H
|
A:CYS38
|
4.3
|
0.0
|
1.0
|
HB2
|
A:GLU20
|
4.4
|
0.0
|
1.0
|
CA
|
A:CYS15
|
4.4
|
0.0
|
1.0
|
HD22
|
A:LEU22
|
4.5
|
0.0
|
1.0
|
H
|
A:LEU19
|
4.6
|
0.0
|
1.0
|
HD23
|
A:LEU22
|
4.7
|
0.0
|
1.0
|
HD12
|
A:ILE17
|
4.7
|
0.0
|
1.0
|
H
|
A:GLU20
|
4.7
|
0.0
|
1.0
|
H
|
A:ILE17
|
4.8
|
0.0
|
1.0
|
HB3
|
A:LEU34
|
4.8
|
0.0
|
1.0
|
HA
|
A:CYS15
|
4.8
|
0.0
|
1.0
|
CB
|
A:ILE17
|
4.9
|
0.0
|
1.0
|
CA
|
A:CYS38
|
4.9
|
0.0
|
1.0
|
HD11
|
A:ILE17
|
4.9
|
0.0
|
1.0
|
HA
|
A:CYS35
|
4.9
|
0.0
|
1.0
|
HA
|
A:LEU34
|
5.0
|
0.0
|
1.0
|
O
|
A:CYS15
|
5.0
|
0.0
|
1.0
|
C
|
A:CYS15
|
5.0
|
0.0
|
1.0
|
N
|
A:CYS38
|
5.0
|
0.0
|
1.0
|
|
Zinc binding site 2 out
of 2 in 2egp
Go back to
Zinc Binding Sites List in 2egp
Zinc binding site 2 out
of 2 in the Solution Structure of the Ring-Finger Domain From Human Tripartite Motif Protein 34
Mono view
Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 2 of Solution Structure of the Ring-Finger Domain From Human Tripartite Motif Protein 34 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Zn400
b:0.0
occ:1.00
|
ND1
|
A:HIS32
|
2.0
|
0.0
|
1.0
|
SG
|
A:CYS56
|
2.3
|
0.0
|
1.0
|
SG
|
A:CYS30
|
2.3
|
0.0
|
1.0
|
SG
|
A:CYS59
|
2.3
|
0.0
|
1.0
|
CE1
|
A:HIS32
|
2.8
|
0.0
|
1.0
|
HB
|
A:VAL58
|
3.0
|
0.0
|
1.0
|
HE1
|
A:HIS32
|
3.0
|
0.0
|
1.0
|
HB2
|
A:HIS32
|
3.0
|
0.0
|
1.0
|
CG
|
A:HIS32
|
3.1
|
0.0
|
1.0
|
H
|
A:CYS59
|
3.5
|
0.0
|
1.0
|
CB
|
A:HIS32
|
3.6
|
0.0
|
1.0
|
CB
|
A:CYS56
|
3.8
|
0.0
|
1.0
|
H
|
A:GLY60
|
3.8
|
0.0
|
1.0
|
CB
|
A:CYS30
|
3.8
|
0.0
|
1.0
|
HB3
|
A:CYS56
|
3.8
|
0.0
|
1.0
|
CB
|
A:CYS59
|
3.9
|
0.0
|
1.0
|
NE2
|
A:HIS32
|
3.9
|
0.0
|
1.0
|
HB2
|
A:CYS30
|
4.0
|
0.0
|
1.0
|
HD13
|
A:LEU28
|
4.0
|
0.0
|
1.0
|
HB3
|
A:HIS32
|
4.1
|
0.0
|
1.0
|
CB
|
A:VAL58
|
4.1
|
0.0
|
1.0
|
N
|
A:CYS59
|
4.1
|
0.0
|
1.0
|
CD2
|
A:HIS32
|
4.1
|
0.0
|
1.0
|
HB3
|
A:CYS59
|
4.1
|
0.0
|
1.0
|
HB3
|
A:CYS30
|
4.1
|
0.0
|
1.0
|
HB2
|
A:CYS56
|
4.2
|
0.0
|
1.0
|
HD11
|
A:ILE61
|
4.3
|
0.0
|
1.0
|
HG21
|
A:VAL58
|
4.3
|
0.0
|
1.0
|
HD12
|
A:LEU28
|
4.3
|
0.0
|
1.0
|
HB
|
A:ILE61
|
4.4
|
0.0
|
1.0
|
HG12
|
A:VAL58
|
4.4
|
0.0
|
1.0
|
HG13
|
A:ILE61
|
4.5
|
0.0
|
1.0
|
CA
|
A:CYS59
|
4.6
|
0.0
|
1.0
|
H
|
A:VAL58
|
4.6
|
0.0
|
1.0
|
HB2
|
A:LEU28
|
4.6
|
0.0
|
1.0
|
HB2
|
A:CYS59
|
4.7
|
0.0
|
1.0
|
CG1
|
A:VAL58
|
4.7
|
0.0
|
1.0
|
CD1
|
A:LEU28
|
4.7
|
0.0
|
1.0
|
N
|
A:GLY60
|
4.7
|
0.0
|
1.0
|
HD12
|
A:ILE61
|
4.7
|
0.0
|
1.0
|
HG11
|
A:VAL58
|
4.7
|
0.0
|
1.0
|
CG2
|
A:VAL58
|
4.7
|
0.0
|
1.0
|
HE2
|
A:HIS32
|
4.8
|
0.0
|
1.0
|
C
|
A:VAL58
|
4.8
|
0.0
|
1.0
|
CD1
|
A:ILE61
|
4.9
|
0.0
|
1.0
|
CA
|
A:HIS32
|
4.9
|
0.0
|
1.0
|
CA
|
A:VAL58
|
4.9
|
0.0
|
1.0
|
N
|
A:HIS32
|
4.9
|
0.0
|
1.0
|
|
Reference:
K.Inoue,
F.Hayashi,
S.Yokoyama.
Solution Structure of the Ring-Finger Domain From Human Tripartite Motif Protein 34 To Be Published.
Page generated: Wed Oct 16 23:08:35 2024
|