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Zinc in PDB 2dt8: Fatty Acid Binding of A Degv Family Protein From Thermus Thermophilus

Protein crystallography data

The structure of Fatty Acid Binding of A Degv Family Protein From Thermus Thermophilus, PDB code: 2dt8 was solved by P.H.Rehse, S.Yokoyama, Riken Structural Genomics/Proteomics Initiative(Rsgi), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 42.11 / 1.48
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 105.548, 36.969, 81.461, 90.00, 127.07, 90.00
R / Rfree (%) 17.3 / 19.7

Zinc Binding Sites:

The binding sites of Zinc atom in the Fatty Acid Binding of A Degv Family Protein From Thermus Thermophilus (pdb code 2dt8). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Fatty Acid Binding of A Degv Family Protein From Thermus Thermophilus, PDB code: 2dt8:

Zinc binding site 1 out of 1 in 2dt8

Go back to Zinc Binding Sites List in 2dt8
Zinc binding site 1 out of 1 in the Fatty Acid Binding of A Degv Family Protein From Thermus Thermophilus


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Fatty Acid Binding of A Degv Family Protein From Thermus Thermophilus within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn501

b:8.7
occ:1.00
OE2 A:GLU67 1.9 5.6 1.0
OE2 A:GLU105 2.0 6.8 1.0
O A:HOH1033 2.2 10.3 1.0
CD A:GLU105 2.9 9.6 1.0
CD A:GLU67 2.9 6.5 1.0
OE1 A:GLU105 3.3 9.6 1.0
OE1 A:GLU67 3.3 7.7 1.0
O A:HOH719 3.3 10.7 1.0
CG A:GLU105 4.1 9.9 1.0
CG A:GLU67 4.3 5.4 1.0
CB A:ALA70 4.9 5.5 1.0

Reference:

P.H.Rehse, S.Yokoyama. Fatty Acid Binding of A Degv Family Protein From Thermus Thermophilus To Be Published.
Page generated: Wed Oct 16 22:51:58 2024

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