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Zinc in PDB 1znm: A Zinc Finger with An Artificial Beta-Turn, Original Sequence Taken From the Third Zinc Finger Domain of the Human Transcriptional Repressor Protein YY1 (Ying and Yang 1, A Delta Transcription Factor), uc(Nmr), 34 Structures

Zinc Binding Sites:

The binding sites of Zinc atom in the A Zinc Finger with An Artificial Beta-Turn, Original Sequence Taken From the Third Zinc Finger Domain of the Human Transcriptional Repressor Protein YY1 (Ying and Yang 1, A Delta Transcription Factor), uc(Nmr), 34 Structures (pdb code 1znm). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the A Zinc Finger with An Artificial Beta-Turn, Original Sequence Taken From the Third Zinc Finger Domain of the Human Transcriptional Repressor Protein YY1 (Ying and Yang 1, A Delta Transcription Factor), uc(Nmr), 34 Structures, PDB code: 1znm:

Zinc binding site 1 out of 1 in 1znm

Go back to Zinc Binding Sites List in 1znm
Zinc binding site 1 out of 1 in the A Zinc Finger with An Artificial Beta-Turn, Original Sequence Taken From the Third Zinc Finger Domain of the Human Transcriptional Repressor Protein YY1 (Ying and Yang 1, A Delta Transcription Factor), uc(Nmr), 34 Structures


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of A Zinc Finger with An Artificial Beta-Turn, Original Sequence Taken From the Third Zinc Finger Domain of the Human Transcriptional Repressor Protein YY1 (Ying and Yang 1, A Delta Transcription Factor), uc(Nmr), 34 Structures within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn29

b:0.0
occ:1.00
NE2 A:HIS26 2.0 0.0 1.0
NE2 A:HIS22 2.0 0.0 1.0
SG A:CYS4 2.3 0.0 1.0
SG A:CYS9 2.3 0.0 1.0
H A:LYS11 2.8 0.0 1.0
CE1 A:HIS22 2.9 0.0 1.0
CE1 A:HIS26 3.0 0.0 1.0
HE1 A:HIS22 3.1 0.0 1.0
CD2 A:HIS26 3.1 0.0 1.0
HB2 A:LYS11 3.1 0.0 1.0
CD2 A:HIS22 3.1 0.0 1.0
HE1 A:HIS26 3.2 0.0 1.0
HZ A:PHE13 3.2 0.0 1.0
HB3 A:CYS9 3.3 0.0 1.0
HD2 A:HIS26 3.3 0.0 1.0
HB2 A:CYS4 3.4 0.0 1.0
CB A:CYS9 3.4 0.0 1.0
HD2 A:HIS22 3.4 0.0 1.0
CB A:CYS4 3.5 0.0 1.0
HE1 A:PHE13 3.7 0.0 1.0
N A:LYS11 3.8 0.0 1.0
H A:GLY10 3.8 0.0 1.0
HB3 A:PHE6 3.9 0.0 1.0
CB A:LYS11 3.9 0.0 1.0
HB3 A:LYS11 4.0 0.0 1.0
HB3 A:CYS4 4.0 0.0 1.0
N A:GLY10 4.0 0.0 1.0
CZ A:PHE13 4.1 0.0 1.0
HB2 A:CYS9 4.1 0.0 1.0
ND1 A:HIS22 4.1 0.0 1.0
ND1 A:HIS26 4.1 0.0 1.0
CG A:HIS26 4.2 0.0 1.0
HA A:VAL23 4.2 0.0 1.0
CG A:HIS22 4.2 0.0 1.0
CE1 A:PHE13 4.3 0.0 1.0
HA2 A:GLY10 4.3 0.0 1.0
H A:PHE6 4.4 0.0 1.0
C A:CYS9 4.4 0.0 1.0
CA A:LYS11 4.5 0.0 1.0
HD2 A:PHE6 4.6 0.0 1.0
CA A:CYS9 4.6 0.0 1.0
CA A:GLY10 4.6 0.0 1.0
H A:THR5 4.6 0.0 1.0
C A:GLY10 4.7 0.0 1.0
HA A:CYS4 4.7 0.0 1.0
HD11 A:ILE25 4.7 0.0 1.0
CA A:CYS4 4.7 0.0 1.0
O A:PHE6 4.9 0.0 1.0
HD1 A:HIS22 5.0 0.0 1.0
CB A:PHE6 5.0 0.0 1.0

Reference:

J.H.Viles, S.U.Patel, J.B.Mitchell, C.M.Moody, D.E.Justice, J.Uppenbrink, P.M.Doyle, C.J.Harris, P.J.Sadler, J.M.Thornton. Design, Synthesis and Structure of A Zinc Finger with An Artificial Beta-Turn. J.Mol.Biol. V. 279 973 1998.
ISSN: ISSN 0022-2836
PubMed: 9642075
DOI: 10.1006/JMBI.1998.1764
Page generated: Wed Dec 16 03:16:00 2020

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