Zinc in PDB 1lo1: Estrogen Related Receptor 2 Dna Binding Domain in Complex with Dna

The binding sites of Zinc atom in the Estrogen Related Receptor 2 Dna Binding Domain in Complex with Dna (pdb code 1lo1). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Estrogen Related Receptor 2 Dna Binding Domain in Complex with Dna, PDB code: 1lo1:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the Estrogen Related Receptor 2 Dna Binding Domain in Complex with Dna


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Estrogen Related Receptor 2 Dna Binding Domain in Complex with Dna within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn195 b:0.0 occ:1.00 SG A:CYS103 2.3 0.0 1.0 SG A:CYS123 2.3 0.0 1.0 SG A:CYS106 2.3 0.0 1.0 SG A:CYS120 2.3 0.0 1.0 H A:CYS120 3.1 0.0 1.0 HB3 A:CYS103 3.1 0.0 1.0 HB2 A:CYS123 3.2 0.0 1.0 CB A:CYS103 3.2 0.0 1.0 H A:CYS106 3.2 0.0 1.0 HB A:VAL105 3.3 0.0 1.0 HE A:ARG152 3.3 0.0 1.0 CB A:CYS123 3.3 0.0 1.0 HB2 A:CYS103 3.5 0.0 1.0 HH21 A:ARG152 3.6 0.0 1.0 H A:CYS123 3.8 0.0 1.0 HB3 A:CYS123 3.9 0.0 1.0 CB A:CYS120 3.9 0.0 1.0 CB A:CYS106 3.9 0.0 1.0 N A:CYS120 4.1 0.0 1.0 NE A:ARG152 4.1 0.0 1.0 HB3 A:CYS106 4.2 0.0 1.0 N A:CYS106 4.2 0.0 1.0 HB3 A:CYS120 4.2 0.0 1.0 CB A:VAL105 4.3 0.0 1.0 NH2 A:ARG152 4.4 0.0 1.0 CA A:CYS120 4.5 0.0 1.0 HA A:SER119 4.5 0.0 1.0 CA A:CYS123 4.5 0.0 1.0 N A:CYS123 4.5 0.0 1.0 CA A:CYS103 4.6 0.0 1.0 H A:VAL105 4.6 0.0 1.0 HB3 A:SER119 4.6 0.0 1.0 CA A:CYS106 4.6 0.0 1.0 HB2 A:CYS106 4.6 0.0 1.0 HG11 A:VAL105 4.7 0.0 1.0 HD3 A:ARG152 4.7 0.0 1.0 CZ A:ARG152 4.7 0.0 1.0 HB2 A:CYS120 4.7 0.0 1.0 HG12 A:VAL105 4.7 0.0 1.0 HB3 A:ASP108 4.8 0.0 1.0 HB1 A:ALA122 4.8 0.0 1.0 H A:GLY107 4.8 0.0 1.0 CG1 A:VAL105 4.9 0.0 1.0 HA A:CYS123 4.9 0.0 1.0 O A:CYS103 4.9 0.0 1.0 O A:CYS120 4.9 0.0 1.0 HA A:CYS103 4.9 0.0 1.0 C A:CYS120 5.0 0.0 1.0 HG22 A:VAL105 5.0 0.0 1.0 CD A:ARG152 5.0 0.0 1.0

Zinc binding site 2 out of 2 in the Estrogen Related Receptor 2 Dna Binding Domain in Complex with Dna


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Estrogen Related Receptor 2 Dna Binding Domain in Complex with Dna within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn196 b:0.0 occ:1.00 SG A:CYS139 2.3 0.0 1.0 SG A:CYS145 2.3 0.0 1.0 SG A:CYS158 2.3 0.0 1.0 SG A:CYS155 2.3 0.0 1.0 HB3 A:CYS155 2.7 0.0 1.0 CB A:CYS155 3.0 0.0 1.0 HB2 A:CYS145 3.1 0.0 1.0 CB A:CYS145 3.2 0.0 1.0 HA A:ASN143 3.4 0.0 1.0 HD2 A:PRO140 3.4 0.0 1.0 HB2 A:CYS139 3.5 0.0 1.0 HB3 A:CYS145 3.5 0.0 1.0 HH22 A:ARG151 3.5 0.0 1.0 HB2 A:CYS155 3.5 0.0 1.0 CB A:CYS139 3.5 0.0 1.0 HH12 A:ARG151 3.5 0.0 1.0 HB2 A:CYS158 3.6 0.0 1.0 CB A:CYS158 3.6 0.0 1.0 H A:ASN143 3.8 0.0 1.0 HA A:CYS139 3.8 0.0 1.0 HB3 A:CYS158 4.0 0.0 1.0 HB1 A:ALA141 4.0 0.0 1.0 H A:ALA141 4.1 0.0 1.0 HD21 A:ASN143 4.1 0.0 1.0 H A:CYS158 4.1 0.0 1.0 CA A:CYS139 4.2 0.0 1.0 H A:GLU144 4.3 0.0 1.0 CA A:ASN143 4.4 0.0 1.0 HB3 A:CYS139 4.4 0.0 1.0 CA A:CYS155 4.4 0.0 1.0 HA A:CYS155 4.4 0.0 1.0 NH2 A:ARG151 4.4 0.0 1.0 CD A:PRO140 4.4 0.0 1.0 NH1 A:ARG151 4.5 0.0 1.0 N A:ASN143 4.5 0.0 1.0 CA A:CYS145 4.6 0.0 1.0 H A:THR142 4.6 0.0 1.0 HD3 A:PRO140 4.7 0.0 1.0 CA A:CYS158 4.9 0.0 1.0 N A:CYS145 4.9 0.0 1.0 N A:CYS158 4.9 0.0 1.0 N A:PRO140 4.9 0.0 1.0 H A:CYS145 4.9 0.0 1.0 HB1 A:ALA157 4.9 0.0 1.0 CZ A:ARG151 5.0 0.0 1.0 N A:GLU144 5.0 0.0 1.0 C A:CYS139 5.0 0.0 1.0

M.D.Gearhart, S.M.A.Holmbeck, R.M.Evans, H.J.Dyson, P.E.Wright. Monomeric Complex of Human Orphan Estrogen Related Receptor-2 with Dna: A Pseudo-Dimer Interface Mediates Extended Half-Site Recognition J.Mol.Biol. V. 327 819 2003.
ISSN: ISSN 0022-2836
PubMed: 12654265
DOI: 10.1016/S0022-2836(03)00183-9