Atomistry » Zinc » PDB 1bvt-1cao » 1bxz
Atomistry »
  Zinc »
    PDB 1bvt-1cao »
      1bxz »

Zinc in PDB 1bxz: Crystal Structure of A Thermophilic Alcohol Dehydrogenase Substrate Complex From Thermoanaerobacter Brockii

Enzymatic activity of Crystal Structure of A Thermophilic Alcohol Dehydrogenase Substrate Complex From Thermoanaerobacter Brockii

All present enzymatic activity of Crystal Structure of A Thermophilic Alcohol Dehydrogenase Substrate Complex From Thermoanaerobacter Brockii:
1.1.1.2;

Protein crystallography data

The structure of Crystal Structure of A Thermophilic Alcohol Dehydrogenase Substrate Complex From Thermoanaerobacter Brockii, PDB code: 1bxz was solved by C.Li, J.Heatwole, S.Soelaiman, M.Shoham, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 2.99
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 80.450, 123.080, 168.030, 90.00, 90.00, 90.00
R / Rfree (%) 21.4 / 26.4

Other elements in 1bxz:

The structure of Crystal Structure of A Thermophilic Alcohol Dehydrogenase Substrate Complex From Thermoanaerobacter Brockii also contains other interesting chemical elements:

Magnesium (Mg) 4 atoms
Chlorine (Cl) 4 atoms

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of A Thermophilic Alcohol Dehydrogenase Substrate Complex From Thermoanaerobacter Brockii (pdb code 1bxz). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 4 binding sites of Zinc where determined in the Crystal Structure of A Thermophilic Alcohol Dehydrogenase Substrate Complex From Thermoanaerobacter Brockii, PDB code: 1bxz:
Jump to Zinc binding site number: 1; 2; 3; 4;

Zinc binding site 1 out of 4 in 1bxz

Go back to Zinc Binding Sites List in 1bxz
Zinc binding site 1 out of 4 in the Crystal Structure of A Thermophilic Alcohol Dehydrogenase Substrate Complex From Thermoanaerobacter Brockii


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of A Thermophilic Alcohol Dehydrogenase Substrate Complex From Thermoanaerobacter Brockii within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn354

b:26.1
occ:1.00
N A:THR38 2.9 48.5 1.0
SG A:CYS37 2.9 48.1 1.0
CA A:CYS37 3.0 46.0 1.0
CB A:CYS37 3.4 47.2 1.0
C A:CYS37 3.4 46.8 1.0
CE A:LYS346 3.5 34.1 1.0
OG1 A:THR38 3.8 53.3 1.0
O A:PRO36 3.8 35.6 1.0
CD A:LYS346 4.0 33.6 1.0
CA A:THR38 4.0 51.2 1.0
CB A:THR38 4.1 51.1 1.0
N A:CYS37 4.2 42.2 1.0
NZ A:LYS346 4.2 31.2 1.0
SD A:MET151 4.3 25.2 1.0
C A:PRO36 4.4 39.7 1.0
SD A:MET337 4.5 47.0 1.0
OE2 A:GLU60 4.5 35.2 1.0
CG A:PRO177 4.5 36.2 1.0
CE A:MET151 4.6 30.6 1.0
O A:CYS37 4.6 46.7 1.0
N A:SER39 4.9 52.3 1.0

Zinc binding site 2 out of 4 in 1bxz

Go back to Zinc Binding Sites List in 1bxz
Zinc binding site 2 out of 4 in the Crystal Structure of A Thermophilic Alcohol Dehydrogenase Substrate Complex From Thermoanaerobacter Brockii


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Crystal Structure of A Thermophilic Alcohol Dehydrogenase Substrate Complex From Thermoanaerobacter Brockii within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Zn354

b:27.8
occ:1.00
SG B:CYS37 2.8 51.4 1.0
CA B:CYS37 3.0 46.3 1.0
N B:THR38 3.2 49.5 1.0
CB B:CYS37 3.3 48.7 1.0
CE B:LYS346 3.4 32.7 1.0
OE2 B:GLU60 3.6 38.0 1.0
C B:CYS37 3.6 47.4 1.0
SD B:MET151 3.9 30.5 1.0
O B:PRO36 3.9 41.9 1.0
NZ B:LYS346 4.0 30.3 1.0
N B:CYS37 4.2 44.8 1.0
OG1 B:THR38 4.3 54.8 1.0
CD B:LYS346 4.3 34.0 1.0
OD2 B:ASP150 4.4 43.4 1.0
CE B:MET151 4.4 31.2 1.0
CA B:THR38 4.5 52.6 1.0
C B:PRO36 4.5 42.2 1.0
CD B:GLU60 4.5 40.1 1.0
CB B:THR38 4.6 52.9 1.0
O B:CYS37 4.8 47.7 1.0
OE1 B:GLU60 4.8 40.7 1.0
CG B:PRO177 4.9 37.0 1.0
N B:SER39 5.0 54.1 1.0

Zinc binding site 3 out of 4 in 1bxz

Go back to Zinc Binding Sites List in 1bxz
Zinc binding site 3 out of 4 in the Crystal Structure of A Thermophilic Alcohol Dehydrogenase Substrate Complex From Thermoanaerobacter Brockii


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 3 of Crystal Structure of A Thermophilic Alcohol Dehydrogenase Substrate Complex From Thermoanaerobacter Brockii within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Zn354

b:26.9
occ:1.00
SG C:CYS37 2.6 61.7 1.0
CB C:CYS37 2.6 54.5 1.0
CA C:CYS37 2.7 51.9 1.0
CE C:LYS346 3.0 37.0 1.0
OE2 C:GLU60 3.1 44.7 1.0
N C:THR38 3.4 54.0 1.0
NZ C:LYS346 3.4 37.4 1.0
O C:PRO36 3.5 48.6 1.0
C C:CYS37 3.5 52.6 1.0
SD C:MET151 3.9 34.0 1.0
N C:CYS37 3.9 48.3 1.0
CD C:LYS346 4.0 38.3 1.0
CD C:GLU60 4.1 43.5 1.0
C C:PRO36 4.1 46.0 1.0
OE1 C:GLU60 4.4 47.4 1.0
CE C:MET151 4.6 33.1 1.0
OD2 C:ASP150 4.6 45.4 1.0
CA C:THR38 4.7 55.1 1.0
O C:CYS37 4.7 53.2 1.0
SD C:MET337 4.9 63.1 1.0
N C:SER39 4.9 57.2 1.0
OG1 C:THR38 5.0 56.1 1.0
CB C:THR38 5.0 55.6 1.0

Zinc binding site 4 out of 4 in 1bxz

Go back to Zinc Binding Sites List in 1bxz
Zinc binding site 4 out of 4 in the Crystal Structure of A Thermophilic Alcohol Dehydrogenase Substrate Complex From Thermoanaerobacter Brockii


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 4 of Crystal Structure of A Thermophilic Alcohol Dehydrogenase Substrate Complex From Thermoanaerobacter Brockii within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Zn354

b:28.0
occ:1.00
SG D:CYS37 2.6 57.1 1.0
N D:THR38 2.8 50.1 1.0
CA D:CYS37 2.8 49.6 1.0
CB D:CYS37 3.0 52.0 1.0
C D:CYS37 3.3 50.3 1.0
CE D:LYS346 3.8 35.9 1.0
CA D:THR38 4.0 52.4 1.0
SD D:MET151 4.1 31.0 1.0
OE2 D:GLU60 4.2 42.0 1.0
O D:PRO36 4.2 44.8 1.0
N D:CYS37 4.2 46.8 1.0
OG1 D:THR38 4.2 56.6 1.0
CB D:THR38 4.2 54.4 1.0
N D:SER39 4.5 54.0 1.0
O D:CYS37 4.5 52.1 1.0
NZ D:LYS346 4.5 38.2 1.0
CE D:MET151 4.5 30.6 1.0
CD D:LYS346 4.6 36.0 1.0
C D:PRO36 4.6 44.2 1.0
OD2 D:ASP150 4.8 41.9 1.0
C D:THR38 4.8 52.8 1.0
CG D:PRO177 4.9 36.1 1.0

Reference:

C.Li, J.Heatwole, S.Soelaiman, M.Shoham. Crystal Structure of A Thermophilic Alcohol Dehydrogenase Substrate Complex Suggests Determinants of Substrate Specificity and Thermostability. Proteins V. 37 619 1999.
ISSN: ISSN 0887-3585
PubMed: 10651277
DOI: 10.1002/(SICI)1097-0134(19991201)37:4<619::AID-PROT12>3.0.CO;2-H
Page generated: Sat Oct 12 22:47:37 2024

Last articles

Zn in 7WT5
Zn in 7WTU
Zn in 7WTV
Zn in 7WTT
Zn in 7WT4
Zn in 7WT3
Zn in 7WSS
Zn in 7WT2
Zn in 7WT0
Zn in 7WT1
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy