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Zinc in PDB, part 563 (files: 22481-22520), PDB 9hdr-9i1i

Experimental structures of coordination spheres of Zinc (Zn) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Zinc atoms. PDB files: 22481-22520 (PDB 9hdr-9i1i).
  1. 9hdr (Zn: 1) - Human Line-1 ORF2P Target-Primed Reverse Transcription Complex with En Domain Resolved
    Other atoms: Mg (1);
  2. 9hfm (Zn: 1) - Translation-Initiation State of Human Mitochondrial Ribosome Small Subunit (State D)
    Other atoms: K (1); Mg (44); Fe (4);
  3. 9hfn (Zn: 1) - Translation-Initiation State of Human Mitochondrial Ribosome Small Subunit (State E)
    Other atoms: Fe (4); K (1); Mg (45);
  4. 9hfo (Zn: 1) - Translation-Initiation State of Human Mitochondrial Ribosome Small Subunit (State G)
    Other atoms: Fe (4); Mg (45); K (1);
  5. 9hfq (Zn: 6) - Cryo-Em Structure of Human CDADC1 Inactive Mutant (E400A): Trimer Without A Ligand
  6. 9hfr (Zn: 12) - Cryo-Em Structure of Human CDADC1 Inactive Mutant (E400A): Hexamer Without A Ligand
  7. 9hfs (Zn: 12) - Cryo-Em Structure of Human CDADC1 Inactive Mutant (E400A): Hexamer with Dctp Bound in the Active Site
  8. 9hhg (Zn: 3) - A Rare Open Conformation For UBL2 Domain of Papain-Like Protease of Sars-COV2
    Other atoms: Cl (1);
  9. 9hhh (Zn: 2) - A Rare Open Conformation For UBL2 Domain of Papain-Like Protease C111S of Sars-COV2
  10. 9hhi (Zn: 1) - A Rare Open Conformation For UBL2 Domain of Papain-Like Protease Without Zinc of Sars-COV2
    Other atoms: Cl (1);
  11. 9hjt (Zn: 5) - Structure of Zincore (SEPHS1:QRICH1) Binding to ZFP91 on Dna
  12. 9hju (Zn: 5) - Structure of 2X Zincore (SEPHS1:QRICH1) Binding to ZFP91 on Dna
  13. 9hlw (Zn: 4) - Prostate Specific Membrane Antigen (Psma) in Complex with NANOBODY7
    Other atoms: Cl (1); Ca (2);
  14. 9hm7 (Zn: 1) - Cryo-Em Structure of Apo Human Separase with the Mutation C2029S
  15. 9hma (Zn: 1) - Cryo-Em Structure of Apo Human Separase
  16. 9hmm (Zn: 2) - Crystal Structure of Mouse ADAT2/ADAT3 Trna Deamination Complex A180V Mutant
    Other atoms: Br (2);
  17. 9hms (Zn: 1) - Cryo-Em Structure of Human Separase Bound to SCC1 (310-550 Aa) and SA2
  18. 9hn0 (Zn: 1) - Cryo-Em Structure of Human Separase Bound to SCC1 (310-550 Aa)
  19. 9hn4 (Zn: 1) - Cryo-Em Structure of Human Separase Bound to Phosphorylated SCC1 (310- 550 Aa)
  20. 9hn5 (Zn: 1) - Cryo-Em Structure of Human Separase Bound to Phosphorylated SCC1 (100- 320 Aa)
  21. 9hnf (Zn: 2) - Beta-Keto Acid Cleavage Enzyme From Paracoccus Denitrificans with Bound Acetoacetate and Acetyl-Coa
  22. 9hnw (Zn: 1) - USP1-UAF1 Bound to LYS63-Linked Diubiquitin
  23. 9hqt (Zn: 2) - Sfx Structure of Cytochrome C Prime Beta From Methylococcus Capsulatus (Bath)
    Other atoms: Fe (2);
  24. 9hs8 (Zn: 2) - Cytochrome C Prime Beta From Methylococcus Capsulatus (Bath) in Complex with Nitric Oxide From Proli Nonoate
    Other atoms: Fe (2);
  25. 9htc (Zn: 2) - Mccp in Complex with Photocaged Nitric Oxide, 1.44 S, 1600 Microjoule, Ssx
    Other atoms: Fe (2);
  26. 9htt (Zn: 1) - Mccp in Complex with Photocaged Nitric Oxide, 1.44 S, 0.19 Microjoule, Ssx
    Other atoms: Fe (2);
  27. 9htu (Zn: 1) - Structure of Endolysin PLYP100 Catalytic Domain
  28. 9htv (Zn: 1) - Mccp in Complex with Photocaged Nitric Oxide, 1.44 S, 0.95 Microjoule, Ssx
    Other atoms: Fe (2);
  29. 9hu1 (Zn: 2) - Ssx Structure of Cytochrome C Prime Beta From Methylococcus Capsulatus (Bath)
    Other atoms: Fe (2);
  30. 9hvi (Zn: 4) - Psma in Complex with Nanobody 8
    Other atoms: Ca (2); Cl (1);
  31. 9hvk (Zn: 4) - Psma in Complex with Nanobody 7 and 8
    Other atoms: Cl (1); Ca (2);
  32. 9hvo (Zn: 8) - Structure of the Transcribing Pol II-RECQL5 Complex
    Other atoms: Mg (1);
  33. 9hvq (Zn: 8) - Structure of the Transcribing Pol II-Dsif-Paf-SPT6-RECQL5 Complex
    Other atoms: Mg (1);
  34. 9hwg (Zn: 10) - Structure of the Transcribing Pol II-Tcr-RECQL5 Complex
    Other atoms: Mg (2);
  35. 9hxv (Zn: 3) - Crystal Structure of TET2-Dna in Complex with IOX1
    Other atoms: Cl (1); Fe (1);
  36. 9hxw (Zn: 20) - Cryo-Em Structure of the Human UBR4/KCMF1/CALM1 Complex (Composite Map)
  37. 9hyz (Zn: 2) - Mccp in Complex with Photocaged Nitric Oxide, Dark Control, Ssx
    Other atoms: Fe (2);
  38. 9i0s (Zn: 2) - Structure of Recql-Adp Complex From Bos Taurus
    Other atoms: Mg (2);
  39. 9i16 (Zn: 6) - Structure of Recql-Dsdna-Adp-ALF4 Complex From Bos Taurus
    Other atoms: K (8); Mg (4);
  40. 9i1i (Zn: 2) - Cryo-Em Structure of Mouse RNF213 (WB3/WB4 + Atp)
    Other atoms: Mg (1);
Page generated: Mon Dec 15 11:45:51 2025

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