Zinc in PDB 9jn9: Cryo-Em Structure of Human SLFN14

The binding sites of Zinc atom in the Cryo-Em Structure of Human SLFN14 (pdb code 9jn9). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Cryo-Em Structure of Human SLFN14, PDB code: 9jn9:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the Cryo-Em Structure of Human SLFN14


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Cryo-Em Structure of Human SLFN14 within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn1001 b:64.6 occ:1.00 ND1 A:HIS282 2.5 58.1 1.0 SG A:CYS318 2.6 65.4 1.0 CB A:CYS284 2.7 65.8 1.0 SG A:CYS284 2.8 65.8 1.0 SG A:CYS319 3.2 62.6 1.0 CE1 A:HIS282 3.2 58.1 1.0 N A:CYS284 3.7 65.8 1.0 CA A:CYS284 3.7 65.8 1.0 CG A:HIS282 3.7 58.1 1.0 OE1 A:GLU286 3.8 71.3 1.0 CD A:PRO288 3.9 68.1 1.0 CB A:CYS319 4.0 62.6 1.0 CB A:CYS318 4.0 65.4 1.0 CB A:HIS282 4.2 58.1 1.0 C A:CYS284 4.5 65.8 1.0 NE2 A:HIS282 4.5 58.1 1.0 N A:CYS319 4.5 62.6 1.0 CA A:HIS282 4.6 58.1 1.0 CD A:GLU286 4.6 71.3 1.0 N A:PHE283 4.6 60.3 1.0 CG A:PRO288 4.7 68.1 1.0 CD2 A:HIS282 4.7 58.1 1.0 CA A:LYS287 4.8 69.1 1.0 C A:CYS318 4.8 65.4 1.0 N A:LYS287 4.8 69.1 1.0 C A:PHE283 4.9 60.3 1.0 CA A:CYS319 4.9 62.6 1.0 N A:CYS285 4.9 70.0 1.0 OE2 A:GLU286 5.0 71.3 1.0 C A:HIS282 5.0 58.1 1.0 CA A:CYS318 5.0 65.4 1.0

Zinc binding site 2 out of 2 in the Cryo-Em Structure of Human SLFN14


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Cryo-Em Structure of Human SLFN14 within 5.0Å range: probe atom residue distance (Å) B Occ B:Zn1001 b:74.0 occ:1.00 SG B:CYS284 2.6 69.7 1.0 SG B:CYS318 2.6 67.5 1.0 CB B:CYS284 2.9 69.7 1.0 ND1 B:HIS282 3.0 60.0 1.0 SG B:CYS319 3.1 64.2 1.0 N B:CYS284 3.6 69.7 1.0 CA B:CYS284 3.8 69.7 1.0 CE1 B:HIS282 3.9 60.0 1.0 CG B:HIS282 4.0 60.0 1.0 CD B:PRO288 4.0 69.3 1.0 CB B:CYS319 4.0 64.2 1.0 CB B:HIS282 4.1 60.0 1.0 CB B:CYS318 4.1 67.5 1.0 C B:CYS284 4.4 69.7 1.0 N B:PHE283 4.5 62.1 1.0 CA B:HIS282 4.5 60.0 1.0 N B:CYS319 4.7 64.2 1.0 CG B:PRO288 4.7 69.3 1.0 C B:PHE283 4.8 62.1 1.0 C B:HIS282 4.8 60.0 1.0 C B:CYS318 4.8 67.5 1.0 O B:CYS284 4.9 69.7 1.0 CA B:CYS319 5.0 64.2 1.0

M.Luo, X.Jia, Z.W.Wang, J.Y.Yang, W.Wang, J.Chen, J.Y.Ou, J.X.Feng, B.Yu, S.Wang, L.Huang, N.V.Morgan, K.Deng, T.Chen, Q.Zhang, S.Gao. Structural and Functional Characterization of Human SLFN14. Nucleic Acids Res. V. 53 2025.
ISSN: ESSN 1362-4962
PubMed: 40464691
DOI: 10.1093/NAR/GKAF484