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Zinc in PDB 9jwe: Native Carbonic Anhydrase II pH 7.8 0 Atm CO2

Enzymatic activity of Native Carbonic Anhydrase II pH 7.8 0 Atm CO2

All present enzymatic activity of Native Carbonic Anhydrase II pH 7.8 0 Atm CO2:
4.2.1.1; 4.2.1.69;

Protein crystallography data

The structure of Native Carbonic Anhydrase II pH 7.8 0 Atm CO2, PDB code: 9jwe was solved by S.W.Lim, C.U.Kim, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.01 / 1.29
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 42.133, 41.234, 72.384, 90, 104.41, 90
R / Rfree (%) 13.8 / 17

Zinc Binding Sites:

The binding sites of Zinc atom in the Native Carbonic Anhydrase II pH 7.8 0 Atm CO2 (pdb code 9jwe). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Native Carbonic Anhydrase II pH 7.8 0 Atm CO2, PDB code: 9jwe:

Zinc binding site 1 out of 1 in 9jwe

Go back to Zinc Binding Sites List in 9jwe
Zinc binding site 1 out of 1 in the Native Carbonic Anhydrase II pH 7.8 0 Atm CO2


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Native Carbonic Anhydrase II pH 7.8 0 Atm CO2 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn301

b:7.7
occ:1.00
O A:HOH466 1.9 9.7 1.0
NE2 A:HIS94 2.0 7.5 1.0
NE2 A:HIS96 2.0 7.8 1.0
ND1 A:HIS119 2.1 6.7 1.0
CE1 A:HIS119 2.9 6.6 1.0
CD2 A:HIS94 3.0 7.5 1.0
CE1 A:HIS96 3.0 8.7 1.0
CE1 A:HIS94 3.0 7.4 1.0
CD2 A:HIS96 3.0 7.8 1.0
CG A:HIS119 3.1 6.7 1.0
CB A:HIS119 3.6 7.0 1.0
O A:HOH504 3.7 10.7 1.0
OG1 A:THR199 3.8 7.6 1.0
OE1 A:GLU106 4.0 7.7 1.0
O A:HOH611 4.1 17.9 1.0
NE2 A:HIS119 4.1 7.5 1.0
CG A:HIS94 4.2 7.7 1.0
ND1 A:HIS94 4.2 7.4 1.0
ND1 A:HIS96 4.2 8.8 1.0
CG A:HIS96 4.2 7.9 1.0
CD2 A:HIS119 4.2 7.3 1.0
O A:HOH636 4.3 17.7 1.0
CD A:GLU106 4.9 7.7 1.0

Reference:

S.W.Lim, H.Jeong, G.H.Kim, D.Min, J.K.Kim, C.U.Kim. Conformational Flexibility of HIS200 Enables Catalytic Activity in the T200H Mutant of Carbonic Anhydrase II. Mol.Cells V. 48 00226 2025.
ISSN: ISSN 1016-8478
PubMed: 40441537
DOI: 10.1016/J.MOCELL.2025.100226
Page generated: Fri Aug 22 18:26:05 2025

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