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Zinc in PDB, part 556 (files: 22201-22240), PDB 9edl-9f2w

Experimental structures of coordination spheres of Zinc (Zn) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Zinc atoms. PDB files: 22201-22240 (PDB 9edl-9f2w).
  1. 9edl (Zn: 6) - Crystal Structure of Francisella Tularensis DSBA1
  2. 9egv (Zn: 6) - Hoil-1 RING2 Domain Bound to Ubiquitin
    Other atoms: Cl (1);
  3. 9egw (Zn: 6) - Hoil-1 RING2 Domain Bound to Ubiquitin-Maltose (Maltose Not Modelled)
    Other atoms: Cl (1);
  4. 9ehz (Zn: 8) - Cryo-Em Structure of Human Rna Polymerase II Elongation Complex in An Intermediate Translocation State
    Other atoms: Mg (1);
  5. 9ei1 (Zn: 8) - Cryo-Em Structure of Human Rna Polymerase II Elongation Complex Bound to the RECQL5 Helicase in the Absence of Nucleotide
    Other atoms: Mg (1);
  6. 9ei4 (Zn: 8) - Cryo-Em Structure of Human Rna Polymerase II Elongation Complex Bound to the RECQL5 Helicase in the Presence of Adp
    Other atoms: Mg (1);
  7. 9eil (Zn: 1) - SIRT6 Bound to An H3K27AC Nucleosome
  8. 9ekb (Zn: 1) - Cryo-Em Structure of Apo-Form Human Dna Polymerase Delta
    Other atoms: Fe (4);
  9. 9emg (Zn: 6) - SMNUC1 Nuclease From Stenotrophomonas Maltophilia in Complex with Guanosine-5'-Monophosphate As A Product of C-Di-Gmp Cleavage
  10. 9emj (Zn: 2) - Sars-Cov-2 Methyltransferase NSP10-16 in Complex with Toyocamycin and M7GPPPA (CAP0-Analog)
  11. 9eml (Zn: 2) - Sars-Cov-2 Methyltransferase NSP10-16 in Complex with Sam and M7GPPPA (CAP0-Analog)/M7GPPPAM (CAP1-Analog)
  12. 9emv (Zn: 2) - Sars-Cov-2 NSP10-16 Methyltransferase in Complex with Sangivamycin and M7GPPPA (CAP0-Analog)/M7GPPPAM (CAP1-Analog)
  13. 9ent (Zn: 2) - Ssx Structure of Autotaxin in Cryogenic Conditions
    Other atoms: Ca (1); I (15); Na (3);
  14. 9erd (Zn: 1) - Human SLFN11 S753D Monomer
    Other atoms: Mg (2);
  15. 9ere (Zn: 2) - SLFN11 Dimer Bound to Trna-Leu-Taa
    Other atoms: Mg (4); Mn (3);
  16. 9erf (Zn: 2) - SLFN11 Dimer Bound to Trna-Met-Cat
    Other atoms: Mn (3); Mg (3);
  17. 9esh (Zn: 6) - Structure of A B-State Intermediate Committed to Discard (Bd-I State)
    Other atoms: Mg (4); K (1);
  18. 9esi (Zn: 6) - Structure of A B-State Intermediate Committed to Discard (Bd-II State)
    Other atoms: Mg (4); K (1);
  19. 9etz (Zn: 1) - III2IV Respiratory Supercomplex From Saccharomyces Cerevisiae
    Other atoms: Cu (3); Mg (1); Fe (12); Ca (1);
  20. 9eu2 (Zn: 3) - GH29A Alpha-L-Fucosidase
    Other atoms: Na (1);
  21. 9eu3 (Zn: 2) - GH29A Alpha-L-Fucosidase
    Other atoms: Cl (1);
  22. 9eu5 (Zn: 9) - Ssx Structure of Autotaxin at Room Temperature
    Other atoms: I (15); Na (2); Ca (1);
  23. 9eun (Zn: 2) - Sars-Cov-2 NSP10-16 Methyltransferase in Complex with Sam and M7GTP
  24. 9ewy (Zn: 2) - Cryoem Structure of Human MICAL1
  25. 9ex9 (Zn: 4) - Cryo Em Map and Model of the Vaccinia Minimal Rna Polymerase
    Other atoms: Mg (1);
  26. 9ey0 (Zn: 2) - Human Mitochondrial Rnase Z with Trna-His
  27. 9ey1 (Zn: 1) - Human Mitochondrial Rnase Z with Trna-His Precursor
  28. 9ey2 (Zn: 2) - Human Mitochondrial Rnase Z with Trna-His-Cca
  29. 9ey5 (Zn: 4) - Crystal Structure of Human Tyrosinase-Related Protein 1 (TYRP1) in Complex with (S)-2,4-Dihydroxyphenylalanine
  30. 9ey6 (Zn: 5) - Crystal Structure of Human Tyrosinase-Related Protein 1 (TYRP1)
  31. 9ey7 (Zn: 4) - Crystal Structure of Human Tyrosinase-Related Protein 1 (TYRP1) in Complex with (R)-2,4-Dihydroxyphenylalanine
  32. 9f0j (Zn: 1) - Cryo-Em Structure of the I923V MDA5-Dsrna Filament Without Nucleotide
  33. 9f1u (Zn: 1) - Cryo-Em Structure of the I923V MDA5-Dsrna Filament with Adp-ALF4 Bound and 81-Degree Helical Twist
    Other atoms: Al (1); F (4);
  34. 9f20 (Zn: 1) - Cryo-Em Structure of the I923V MDA5-Dsrna Filament with Adp-ALF4 Bound and 88-Degree Helical Twist
    Other atoms: F (4); Al (1);
  35. 9f26 (Zn: 1) - Crystal Structure of the PRIS_PRIL-RPA2WH Ternary Complex From P. Abyssi
  36. 9f28 (Zn: 1) - Crystal Structure of the Heterodimeric Primase From Pyrococcus Abyssi (Deletion of the Pril-Ctd Domain)
    Other atoms: Mg (2);
  37. 9f29 (Zn: 3) - Pyrococcus Abyssi Pold in Complex with RPA2 Winged-Helix Domain Class 1 (Composite Map)
    Other atoms: Fe (1);
  38. 9f2a (Zn: 3) - Pyrococcus Abyssi Pold in Complex with RPA2 Winged-Helix Domain Class 2 (Composite Map)
    Other atoms: Fe (1);
  39. 9f2l (Zn: 1) - Cryo-Em Structure of the I923V MDA5-Dsrna Filament with Adp-ALF4 Bound and 73-Degree Helical Twist
    Other atoms: F (4); Al (1);
  40. 9f2w (Zn: 1) - Cryo-Em Structure of the I923V MDA5-Dsrna Filament in Complex with Atp
Page generated: Fri Aug 22 17:15:27 2025

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