Zinc in PDB, part 419 (files: 16721-16760),
PDB 6ygw-6ykq
Experimental structures of coordination spheres of Zinc (Zn) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Zinc atoms. PDB files: 16721-16760 (PDB 6ygw-6ykq).
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6ygw (Zn: 1) - Tgt W178F Mutant Labelled Mit 5F-Trp Crystallised at pH 5.5
Other atoms:
F (3);
Cl (1);
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6ygx (Zn: 1) - Trna-Guanine Transglycosylase (Tgt) Labeled with 5-Fluorotryptophan in Co-Crystallized Complex with 6-Amino-2-(Methylamino)-4-(2-((2R,3R,4S, 5R,6S)-3,4,5,6-Tetramethoxytetrahydro-2H-Pyran-2-Yl)Ethyl)-1H- Imidazo[4,5-G]Quinazolin-8(7H)-One
Other atoms:
F (4);
-
6ygy (Zn: 1) - Trna-Guanine Transglycosylase (Tgt) Labeled with 5-Fluorotryptophan in Co-Crystallized Complex with 6-Amino-4-[2-(4-Methylphenyl)Ethyl]-1,7- Dihydro-8H-Imidazo[4,5-G]Quinazolin-8-One
Other atoms:
F (4);
-
6ygz (Zn: 1) - Trna Guanine Transglycosylase (Tgt) Labelled with 5-Fluoro-Tryptophan in Co-Crystallized Complex with 6-Amino-4-(2-Phenylethyl)-1,7- Dihydro-8H-Imidazo[4,5-G]Quinazolin-8-One
Other atoms:
F (4);
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6yh1 (Zn: 1) - Trna-Guanine Transglycosylase (Tgt) Labeled with 5-Fluorotryptophan in Co-Crystallized Complex with 6-Amino-2-(Methylamino)-4-(4- (Trifluoromethyl)Phenethyl)-3,7-Dihydro-8H-Imidazo[4,5-G]Quinazolin- 8-One
Other atoms:
F (10);
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6yh2 (Zn: 1) - Trna-Guanine Transglycosylase (Tgt) Labeled with 5-Fluorotryptophan in Co-Crystallized Complex with 2-(Methylamino)-1,7-Dihydro-8H- Imidazo[4,5-G]Quinazolin-8-One
Other atoms:
F (4);
Cl (1);
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6yh3 (Zn: 1) - Trna-Guanine Transglycosylase (Tgt) in Co-Crystallized Complex with 6- Amino-2-(Methylamino)-4-Phenethyl-1,7-Dihydro-8H-Imidazo[4,5- G]Quinazolin-8-One
Other atoms:
F (4);
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6yh4 (Zn: 1) - Crystal Structure of Chimeric Carbonic Anhydrase XII with 2,3,5,6- Tetrafluoro-4-(Propylthio)Benzenesulfonamide
Other atoms:
F (8);
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6yh5 (Zn: 1) - Crystal Structure of Chimeric Carbonic Anhydrase XII with 2-Chloro-4- [(Pyrimidin-2-Ylsulfanyl)Acetyl]Benzenesulfonamide
Other atoms:
Cl (1);
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6yh6 (Zn: 1) - Crystal Structure of Chimeric Carbonic Anhydrase XII with 2- (Cyclooctylamino)-3,5,6-Trifluorobenzenesulfonamide
Other atoms:
F (3);
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6yh7 (Zn: 1) - Crystal Structure of Chimeric Carbonic Anhydrase XII with 3-[(1S)-2,3- Dihydro-1H-Inden-1-Ylamino]-2,5,6-Trifluoro-4-[(2-Hydroxyethyl) Sulfonyl]Benzenesulfonamide
Other atoms:
F (6);
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6yh8 (Zn: 1) - Crystal Structure of Chimeric Carbonic Anhydrase XII with 2-[(1S)-1,2, 3,4-Tetrahydronapthalen-1-Ylamino)-3,5,6-Trifluorobenzenesulfonamide
Other atoms:
F (3);
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6yh9 (Zn: 1) - Crystal Structure of Chimeric Carbonic Anhydrase XII with 2,3,6- Trifluoro-5-{[(1R,2S)-2-Hydroxy-1,2-Diphenylethyl]Amino}-4-[(2- Hydroxyethyl)Sulfonyl]Benzenesulfonamide
Other atoms:
F (3);
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6yha (Zn: 1) - Crystal Structure of Chimeric Carbonic Anhydrase XII with 2,3,5,6- Tetrafluoro-4-(Propylthio)Benzenesulfonamide
Other atoms:
F (8);
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6yhb (Zn: 1) - Crystal Structure of Chimeric Carbonic Anhydrase XII with 4-[(4,6- Dimethylpyrimidin-2-Yl)Thio]-2,3,5,6-Tetrafluorobenzenesulfonamide
Other atoms:
F (4);
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6yhc (Zn: 1) - Crystal Structure of Chimeric Carbonic Anhydrase XII with 3- (Benzylamino)-2,5,6-Trifluoro-4-[(2-Hydroxyethyl) Sulfonyl]Benzenesulfonamide
Other atoms:
F (6);
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6yhd (Zn: 1) - Trna-Guanine Transglycosylase (Tgt) Labeled with 5-Fluorotryptophan in Co-Crystallized Complex with 6-Amino-4-(2-((2R,3S,4R,5R)-3,4- Dihydroxy-5-Methoxytetrahydrofuran-2-Yl)Ethyl)-2-(Methylamino)-3,7- Dihydro-8H-Imidazo[4,5-G]Quinazolin-8-One
Other atoms:
F (4);
Cl (1);
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6yhe (Zn: 1) - Trna-Guanine Transglycosylase (Tgt) Labeled with 5-Fluorotryptophan in Co-Crystallized Complex with 6-Amino-4-(2-((3AR,4R,6R,6AR)-6-Methoxy- 2,2-Dimethyltetrahydrofuro[3,4-D][1,3]Dioxol-4-Yl)Ethyl)-2- (Methylamino)-1H-Imidazo[4,5-G]Quinazolin-8(7H)-One
Other atoms:
F (4);
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6yhq (Zn: 1) - Crystal Structure of Fab F5.18.6, Anti-Plasmodium Vivax AMA1
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6yhr (Zn: 2) - Crystal Structure of Werner Syndrome Helicase
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6yhs (Zn: 1) - Acinetobacter Baumannii Ribosome-Amikacin Complex - 50S Subunit
Other atoms:
Mg (160);
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6yi1 (Zn: 10) - Crystal Structure of Human Glutaminyl Cyclase in Complex with Glu(Gamma-Hydrazide)-Phe-Ala
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6yi6 (Zn: 1) - Structural and Kinetic Evaluation of Phosphoramidate Inhibitors on Thermolysin
Other atoms:
Cs (2);
Ca (4);
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6yie (Zn: 2) - Structure of A Borealin-Incenp-Survivin Complex
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6yif (Zn: 1) - Structure of Chromosomal Passenger Complex (Cpc) Bound to Phosphorylated Histone 3 Peptide at 1.8 A.
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6yih (Zn: 1) - Structure of Chromosomal Passenger Complex (Cpc) Bound to Phosphorylated Histone 3 Peptide at 2.6 A.
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6yiq (Zn: 2) - Trna-Guanine Transglycosylase (Tgt) in Co-Crystallized Complex (P2) with 6-Amino-2-(Methylamino)-4-Phenethyl-1,7-Dihydro-8H-Imidazo[4,5- G]Quinazolin-8-One
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6yj1 (Zn: 2) - The M23 Peptidase Domain of the Staphylococcal Phage 2638A Endolysin
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6yj3 (Zn: 2) - Metala-Carborane Di-Propyl-Sulfonamide
Other atoms:
Co (2);
-
6yj4 (Zn: 1) - Structure of Yarrowia Lipolytica Complex I at 2.7 A
Other atoms:
Fe (28);
-
6yjm (Zn: 2) - Crystal Structure of the Catalytic Domain of Adamts-5 in Complex with the Inhibitor GLPG1972
Other atoms:
F (4);
Ca (6);
-
6yjn (Zn: 1) - Crystal Structure of Beta Carbonic Anhydrase From the Pathogenic Bacterium Burkholderia Pseudomallei.
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6yjy (Zn: 2) - Crystal Structure of Human Glutaminyl Cyclase in Complex with Neurotensin 1-5
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6ykc (Zn: 1) - Metala-Carborane Di-Ethyl-Sulfonamide (Trans Isomer) in Complex with Ca IX Mimic
Other atoms:
Co (2);
-
6ykh (Zn: 1) - Metala-Carborane Di-Ethyl-Sulfonamide (Cis Isomer) in Complex with Ca IX Mimic
Other atoms:
Co (1);
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6ykk (Zn: 1) - Neisseria Gonorrhoeae Leucyl-Trna Synthetase in Complex with Compound 15
Other atoms:
Mg (1);
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6ykl (Zn: 1) - Neisseria Gonorrhoeae Leucyl-Trna Synthetase in Complex with Compound 11K
Other atoms:
Mg (1);
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6ykn (Zn: 1) - Neisseria Gonorrhoeae Leucyl-Trna Synthetase in Complex with Compound 11B
Other atoms:
Mg (1);
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6yko (Zn: 1) - Neisseria Gonorrhoeae Leucyl-Trna Synthetase in Complex with Compound 11A
Other atoms:
Mg (1);
-
6ykq (Zn: 1) - Neisseria Gonorrhoeae Leucyl-Trna Synthetase in Complex with Compound 11C
Other atoms:
Mg (1);
Page generated: Mon Dec 15 11:40:21 2025
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