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Zinc in PDB, part 407 (files: 16241-16280), PDB 6ted-6tt8

Experimental structures of coordination spheres of Zinc (Zn) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Zinc atoms. PDB files: 16241-16280 (PDB 6ted-6tt8).
  1. 6ted (Zn: 9) - Structure of Complete, Activated Transcription Complex Pol II-Dsif- Paf-SPT6 Uncovers Allosteric Elongation Activation By RTF1
    Other atoms: Mg (1);
  2. 6tgd (Zn: 4) - Crystal Structure of Ndm-1 in Complex with Triazole-Based Inhibitor OP31
    Other atoms: Ca (4);
  3. 6tgi (Zn: 6) - Crystal Structure of Vim-2 in Complex with Triazole-Based Inhibitor OP24
    Other atoms: Cl (2);
  4. 6thh (Zn: 1) - Crystal Structure of Type I-D Crispr-Cas Nuclease CAS10D in Complex with the SIRV3 ACRID1 (GP02) Anti-Crispr Protein
  5. 6thk (Zn: 8) - Structural Mechanism of Pyocin S5 Import Into Pseudomonas Aeruginosa
  6. 6thp (Zn: 2) - Neprilysin in Complex with the Inhibitor (R)-4-(1-Carboxy-3-(3'- Chlorobiphenyl-4-Yl)Propan-2-Ylamino)-4-Oxobutanoic Acid
    Other atoms: Cl (2);
  7. 6thv (Zn: 1) - X-Ray Structure of the Danio Rerio Histone Deacetylase 6 (HDAC6; Catalytic Domain 2) in Complex with Tubastatin A
    Other atoms: K (3); Na (1);
  8. 6tjv (Zn: 1) - Structure of the Ndh-1MS Complex From Thermosynechococcus Elongatus
    Other atoms: Mg (1); Fe (12);
  9. 6tl0 (Zn: 25) - Solution Structure and 1H, 13C and 15N Chemical Shift Assignments For the Complex of VPS29 with Varp 687-747
  10. 6tl5 (Zn: 4) - Three Dimensional Structure of Human Carbonic Anhydrase IX in Complex with Sulfonamide
  11. 6tl6 (Zn: 4) - Three Dimensional Structure of Human Carbonic Anhydrase IX in Complex with Sulfonamide
  12. 6tld (Zn: 4) - Crystal Structure of Schistosoma Mansoni HDAC8 Complexed with A Triazole Hydroxamate Inhibitor 2
    Other atoms: K (8);
  13. 6tli (Zn: 1) - Thermolysin (60% Isopropanol Soaked Crystals)
    Other atoms: Ca (4);
  14. 6tlx (Zn: 2) - Crystal Structure of the Unconventional Kinetochore Protein Perkinsela Sp. KKT2A Central Domain
  15. 6tly (Zn: 3) - Crystal Structure of the Unconventional Kinetochore Protein Bodo Saltans KKT2 Central Domain
    Other atoms: Cl (1);
  16. 6tm5 (Zn: 3) - Cryo-Em Structure of the Anaphase-Promoting Complex/Cyclosome, in Complex with the NEK2A Substrate at 3.9 Angstrom Resolution
  17. 6tm9 (Zn: 2) - Vim-2_1DD-. Triazole Inhibitors with Promising Inhibitor Effects Against Antibiotic Resistance Metallo-Beta-Lactamases
    Other atoms: Cl (2);
  18. 6tma (Zn: 6) - Vim-1_1DJ- Triazole Inhibitors with Promising Inhibitor Effects Against Antibiotic Resistance Metallo-Beta-Lactamases
    Other atoms: I (2); Cl (4);
  19. 6tmb (Zn: 6) - Vim-2_1DI-Triazole Inhibitors with Promising Inhibitor Effects Against Antibiotic Resistance Metallo-Beta-Lactamases
    Other atoms: I (1); Cl (4);
  20. 6tmc (Zn: 2) - Vim-1_1DH-Triazole Inhibitors with Promising Inhibitor Effects Against Antibiotic Resistance Metallo-Beta-Lactamases
    Other atoms: I (2);
  21. 6tmf (Zn: 4) - Structure of An Archaeal ABCE1-Bound Ribosomal Post-Splitting Complex
    Other atoms: Mg (29); Fe (8);
  22. 6tmn (Zn: 1) - Structures of Two Thermolysin-Inhibitor Complexes That Differ By A Single Hydrogen Bond
    Other atoms: Ca (4);
  23. 6tnk (Zn: 1) - Carboxypeptidase T with N-Sulfamoyl-L-Valine
    Other atoms: Ca (5);
  24. 6tnn (Zn: 3) - Mini-Rnase III (Mini-III) Bound to 50S Ribosome with Precursor 23S Rrna
    Other atoms: Mg (221);
  25. 6tnt (Zn: 3) - Sumoylated Apoapc/C with Repositioned APC2 Whb Domain
  26. 6tny (Zn: 1) - Processive Human Polymerase Delta Holoenzyme
    Other atoms: Fe (4);
  27. 6tnz (Zn: 1) - Human Polymerase Delta-FEN1-Pcna Toolbelt
    Other atoms: Fe (4);
  28. 6tpm (Zn: 2) - Crystal Structure of Ampc From E.Coli with Relebactam (Mk-7655)
    Other atoms: Cl (1);
  29. 6tpq (Zn: 3) - Rnase M5 Bound to 50S Ribosome with Precursor 5S Rrna
    Other atoms: Mg (219);
  30. 6tps (Zn: 7) - Early Intermediate Rna Polymerase I Pre-Initiation Complex - Eipic
    Other atoms: Mg (1);
  31. 6tqn (Zn: 2) - Rrn Anti-Termination Complex Without S4
    Other atoms: Mg (3);
  32. 6tqo (Zn: 2) - Rrn Anti-Termination Complex
    Other atoms: Mg (3);
  33. 6tr8 (Zn: 20) - Corynebacterium Diphtheriae Methionine Sulfoxide Reductase B (Msrb) Solution Structure - Reduced Form
  34. 6trk (Zn: 4) - Phl P 6 Fold Stabilized Mutant - S46Y
  35. 6tse (Zn: 2) - Crystal Structure of 1-Methylindoline-2,3-Dione Covalently Bound to the pH Domain of Bruton'S Tyrosine Kinase Mutant R28C
    Other atoms: Mg (2);
  36. 6tt1 (Zn: 2) - Crystal Structure of 'RES_S2 Mutant Human Angiotensin-1 Converting Enzyme N-Domain in Complex with 33RE.
    Other atoms: Cl (2);
  37. 6tt2 (Zn: 2) - The pH Domain of Bruton'S Tyrosine Kinase Mutant R28C
    Other atoms: Mg (2);
  38. 6tt3 (Zn: 2) - Crystal Structure of 'RES_S2 Mutant Human Angiotensin-1 Converting Enzyme N-Domain in Complex with SG6.
    Other atoms: Ca (2); Cl (2);
  39. 6tt4 (Zn: 2) - Crystal Structure of 'RES_S2 Mutant Human Angiotensin-1 Converting Enzyme N-Domain in Complex with Omapatrilat.
    Other atoms: Cl (2);
  40. 6tt8 (Zn: 112) - Haddock Model of Ndm-1/Morin Complex
Page generated: Mon Dec 15 11:39:53 2025

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