Zinc in PDB, part 264 (files: 10521-10560),
PDB 5b8d-5c13
Experimental structures of coordination spheres of Zinc (Zn) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Zinc atoms. PDB files: 10521-10560 (PDB 5b8d-5c13).
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5b8d (Zn: 3) - Crystal Structure of A Low Occupancy Fragment Candidate (N-(4-Methyl- 1,3-Thiazol-2-Yl)Propanamide) Bound Adjacent to the Ubiquitin Binding Pocket of the HDAC6 Zinc-Finger Domain
Other atoms:
Na (1);
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5b8i (Zn: 1) - Crystal Structure of Calcineurin A and Calcineurin B in Complex with FKBP12 and FK506 From Coccidioides Immitis Rs
Other atoms:
Fe (1);
Ca (4);
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5bjs (Zn: 8) - Apo CTPRC2 in An Autoinhibited State
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5bnl (Zn: 1) - Deciphering the Mechanism of Carbonic Anhydrase Inhibition with Coumarins and Thiocoumarins
Other atoms:
Hg (1);
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5bot (Zn: 4) - X-Ray Co-Structure of Mmp-13 with Ethyl 5-Carbamoyl-1H-Indole-2- Carboxylate
Other atoms:
Ca (6);
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5boy (Zn: 4) - X-Ray Co-Structure of Mmp-13 with Ethyl 5-(1-Methyl-1H-Imidazol-5-Yl)- 1H-Indole-2-Carboxylate
Other atoms:
Ca (6);
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5bpa (Zn: 4) - X-Ray Co-Structure of Mmp-13 with 4-[({5-[2-(Ethoxycarbonyl)-1H-Indol- 5-Yl]-1-Methyl-1H-Pyrazol-3-Yl}Formamido)Methyl]Benzoate
Other atoms:
Ca (6);
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5bpp (Zn: 1) - Structure of Human Leukotriene A4 Hydrolase in Complex with Inhibitor 4AZ
Other atoms:
Yb (3);
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5bq1 (Zn: 1) - Capturing Carbon Dioxide in Beta Carbonic Anhydrase
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5bqk (Zn: 3) - Crystal Structure of C-Terminal Domain of ICP27 Protein From Hsv-1
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5bqm (Zn: 2) - Crystal Structure of SXN101959, A Clostridium Botulinum Neurotoxin Type D Derivative and Targeted Secretion Inhibitor
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5bqq (Zn: 2) - Human Insulin with Intra-Chain Chemical Crosslink Between Modified B27 and B30
Other atoms:
Cl (2);
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5br4 (Zn: 2) - E. Coli Lactaldehyde Reductase (Fuco) M185C Mutant
Other atoms:
Cl (4);
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5br8 (Zn: 2) - Ambient-Temperature Crystal Structure of 30S Ribosomal Subunit From Thermus Thermophilus in Complex with Paromomycin
Other atoms:
Mg (287);
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5brk (Zn: 1) - PMOB1-LATS1 Complex
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5brm (Zn: 6) - Structural Basis For MOB1-Dependent Activation of the Core Mst-Lats Kinase Cascade in Hippo Signaling
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5bru (Zn: 1) - Catalytic Improvement of An Artificial Metalloenzyme By Computational Design
Other atoms:
Cl (1);
Ir (1);
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5brv (Zn: 1) - Catalytic Improvement of An Artificial Metalloenzyme By Computational Design
Other atoms:
Cl (1);
Ir (1);
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5brw (Zn: 1) - Catalytic Improvement of An Artificial Metalloenzyme By Computational Design
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5btr (Zn: 3) - Crystal Structure of SIRT1 in Complex with Resveratrol and An Amc- Containing Peptide
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5bu7 (Zn: 7) - Crystal Structure of An Engineered Protein That Forms Nanotubes with Tunable Diameters
Other atoms:
Fe (2);
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5bua (Zn: 1) - Lysine 120-Acetylated P53 Dna Binding Domain in A Complex with Dna.
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5buc (Zn: 2) - Oxidized Quinone Reductase 2 in Complex with Ethidium
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5buo (Zn: 6) - A Receptor Molecule
Other atoms:
Mg (1);
Ca (1);
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5bvr (Zn: 3) - Actin Binding Domain of Alpha-Actinin From Schizosaccharomyces Pombe
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5bw8 (Zn: 1) - 2.8 A Crystal Structure of A GET3-GET4-GET5 Intermediate Complex From S.Cerevisiae
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5bwk (Zn: 4) - 6.0 A Crystal Structure of A GET3-GET4-GET5 Intermediate Complex From S.Cerevisiae
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5bwl (Zn: 1) - Crystal Structure of SIRT5 in Complex with A Coumarin-Labelled Succinyl Peptide
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5bwn (Zn: 1) - Crystal Structure of SIRT3 with A H3K9 Peptide Containing A Myristoyl Lysine
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5bwo (Zn: 1) - Crystal Structure of Human SIRT3 in Complex with A Palmitoyl H3K9 Peptide
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5bwz (Zn: 2) - Crystal Structure of S39E HDAC8 in Complex with Droxinostat
Other atoms:
K (4);
Cl (2);
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5byi (Zn: 1) - Human Carbonic Anhydrase II with An Azobenzene Inhibitor (1D)
Other atoms:
Hg (1);
K (2);
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5bz0 (Zn: 1) - Crystal Structure of Ibv Papain-Like Protease Plpro C101S Mutant in Complex with Ubiquitin
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5c0k (Zn: 1) - Fragment-Based Drug Discovery Targeting Inhibitor of Apoptosis Proteins: Compound 3
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5c0l (Zn: 1) - Fragment-Based Drug Discovery Targeting Inhibitor of Apoptosis Proteins: Compound 2
Other atoms:
Br (1);
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5c0q (Zn: 35) - Crystal Structure of Zn Bound Cbsa From Thermotoga Neapolitana
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5c0w (Zn: 1) - Structure of A 12-Subunit Nuclear Exosome Complex Bound to Single- Stranded Rna Substrates
Other atoms:
Mg (1);
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5c0x (Zn: 1) - Structure of A 12-Subunit Nuclear Exosome Complex Bound to Structured Rna
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5c11 (Zn: 2) - Crystal Structure of JARID1A Phd Finger Bound to Histone H3C4ME3 Peptide
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5c13 (Zn: 8) - Crystal Structure of TAF3 Phd Finger Bound to Histone H3C4ME3 Peptide
Page generated: Mon Dec 15 11:34:16 2025
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