Atomistry » Zinc » PDB 5brv-5c3k » 5bw8
Atomistry »
  Zinc »
    PDB 5brv-5c3k »
      5bw8 »

Zinc in PDB 5bw8: 2.8 A Crystal Structure of A GET3-GET4-GET5 Intermediate Complex From S.Cerevisiae

Protein crystallography data

The structure of 2.8 A Crystal Structure of A GET3-GET4-GET5 Intermediate Complex From S.Cerevisiae, PDB code: 5bw8 was solved by H.B.Gristick, J.W.Chartron, W.M.Clemons, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.80 / 2.80
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 111.960, 238.050, 52.190, 90.00, 90.00, 90.00
R / Rfree (%) 22.4 / 26.2

Zinc Binding Sites:

The binding sites of Zinc atom in the 2.8 A Crystal Structure of A GET3-GET4-GET5 Intermediate Complex From S.Cerevisiae (pdb code 5bw8). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the 2.8 A Crystal Structure of A GET3-GET4-GET5 Intermediate Complex From S.Cerevisiae, PDB code: 5bw8:

Zinc binding site 1 out of 1 in 5bw8

Go back to Zinc Binding Sites List in 5bw8
Zinc binding site 1 out of 1 in the 2.8 A Crystal Structure of A GET3-GET4-GET5 Intermediate Complex From S.Cerevisiae


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of 2.8 A Crystal Structure of A GET3-GET4-GET5 Intermediate Complex From S.Cerevisiae within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn401

b:0.1
occ:1.00
SG B:CYS285 2.2 0.1 1.0
SG B:CYS288 2.3 0.1 1.0
SG A:CYS288 2.3 94.8 1.0
SG A:CYS285 2.4 0.6 1.0
CB B:CYS285 3.0 0.1 1.0
CB B:CYS288 3.4 98.5 1.0
CB A:CYS285 3.5 0.0 1.0
CB A:CYS288 3.7 94.8 1.0
N B:CYS288 4.0 94.8 1.0
N A:CYS288 4.0 92.6 1.0
N A:CYS285 4.2 0.1 1.0
CA B:CYS285 4.2 0.5 1.0
CA B:CYS288 4.3 95.2 1.0
CA A:CYS285 4.3 0.2 1.0
CA A:CYS288 4.4 94.6 1.0
CB A:ARG287 4.6 97.4 1.0
C A:CYS285 4.7 0.6 1.0
O A:CYS285 4.7 0.3 1.0
CB B:ARG287 4.7 0.1 1.0
O A:HIS283 4.8 0.2 1.0
C A:ARG287 4.9 94.4 1.0
C B:CYS285 4.9 0.9 1.0

Reference:

H.B.Gristick, M.E.Rome, J.W.Chartron, M.Rao, S.Hess, S.O.Shan, W.M.Clemons. Mechanism of Assembly of A Substrate Transfer Complex During Tail-Anchored Protein Targeting. J.Biol.Chem. V. 290 30006 2015.
ISSN: ESSN 1083-351X
PubMed: 26451041
DOI: 10.1074/JBC.M115.677328
Page generated: Sun Oct 27 13:34:39 2024

Last articles

Br in 1JZV
Br in 1JHD
Br in 1J91
Br in 1JXL
Br in 1JPQ
Br in 1JID
Br in 1J9H
Br in 1J6S
Br in 1IJV
Br in 1IZ8
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy