Zinc in PDB 8wrx: Anti-Crispr Type II-A 28

The structure of Anti-Crispr Type II-A 28, PDB code: 8wrx was solved by G.E.Kim, H.H.Park, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	28.83 / 1.45
Space group	P 41 21 2
Cell size a, b, c (Å), α, β, γ (°)	64.43, 64.43, 62.82, 90, 90, 90
R / Rfree (%)	20.2 / 22.1

The binding sites of Zinc atom in the Anti-Crispr Type II-A 28 (pdb code 8wrx). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Anti-Crispr Type II-A 28, PDB code: 8wrx:

Zinc binding site 1 out of 1 in the Anti-Crispr Type II-A 28


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Anti-Crispr Type II-A 28 within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn101 b:26.9 occ:1.00 O A:GLY44 2.6 21.5 1.0 O A:ILE42 2.6 23.0 1.0 O A:GLU39 2.8 18.2 1.0 O A:HOH245 2.8 19.3 1.0 CZ2 A:TRP45 3.4 20.1 1.0 CE2 A:TRP45 3.4 19.7 1.0 CH2 A:TRP45 3.4 21.0 1.0 CZ3 A:TRP45 3.5 21.2 1.0 CD2 A:TRP45 3.5 20.8 1.0 C A:GLY44 3.6 20.2 1.0 CE3 A:TRP45 3.6 21.8 1.0 N A:GLY44 3.8 20.6 1.0 C A:ILE42 3.9 21.9 1.0 C A:GLU39 3.9 18.6 1.0 C A:PRO43 4.0 21.9 1.0 NE1 A:TRP45 4.1 24.5 1.0 CA A:GLY44 4.3 22.6 1.0 CG A:TRP45 4.3 20.9 1.0 CB A:GLU39 4.4 19.4 1.0 O A:PRO43 4.4 24.9 1.0 CA A:PRO43 4.5 19.6 1.0 O A:ALA40 4.5 19.4 1.0 N A:ILE42 4.6 19.3 1.0 CD1 A:TRP45 4.6 24.5 1.0 C A:ALA40 4.6 20.2 1.0 N A:TRP45 4.6 23.0 1.0 N A:PRO43 4.7 20.7 1.0 CA A:GLU39 4.7 19.3 1.0 CA A:ALA40 4.8 18.5 1.0 N A:ALA40 4.8 19.2 1.0 CA A:ILE42 4.8 22.0 1.0 O A:HOH235 4.9 26.6 1.0 CA A:TRP45 5.0 21.5 1.0 CG1 A:ILE42 5.0 23.0 1.0

G.E.Kim, H.H.Park. ACRIIA28 Is A Metalloprotein That Specifically Inhibits Targeted-Dna Loading to SPYCAS9 By Binding to the REC3 Domain. Nucleic Acids Res. V. 52 6459 2024.
ISSN: ESSN 1362-4962
PubMed: 38726868
DOI: 10.1093/NAR/GKAE357