Zinc in PDB 8wep: Zn-Carbonic Anhydrase II 5 Atm of CO2 Pressure (pH 7.8)

Enzymatic activity of Zn-Carbonic Anhydrase II 5 Atm of CO2 Pressure (pH 7.8)

All present enzymatic activity of Zn-Carbonic Anhydrase II 5 Atm of CO2 Pressure (pH 7.8):
4.2.1.1;

Protein crystallography data

The structure of Zn-Carbonic Anhydrase II 5 Atm of CO2 Pressure (pH 7.8), PDB code: 8wep was solved by C.U.Kim, J.K.Kim, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.00 / 1.20
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 42.333, 41.624, 72.338, 90, 104.25, 90
R / Rfree (%) 12.1 / 13.6

Zinc Binding Sites:

The binding sites of Zinc atom in the Zn-Carbonic Anhydrase II 5 Atm of CO2 Pressure (pH 7.8) (pdb code 8wep). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Zn-Carbonic Anhydrase II 5 Atm of CO2 Pressure (pH 7.8), PDB code: 8wep:

Zinc binding site 1 out of 1 in 8wep

Go back to Zinc Binding Sites List in 8wep
Zinc binding site 1 out of 1 in the Zn-Carbonic Anhydrase II 5 Atm of CO2 Pressure (pH 7.8)


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Zn-Carbonic Anhydrase II 5 Atm of CO2 Pressure (pH 7.8) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn301

b:6.1
occ:1.00
O A:HOH446 1.9 8.7 1.0
ND1 A:HIS119 2.0 5.4 1.0
NE2 A:HIS94 2.0 6.0 1.0
NE2 A:HIS96 2.0 6.3 1.0
CE1 A:HIS119 2.9 5.7 1.0
CD2 A:HIS94 3.0 6.7 1.0
CD2 A:HIS96 3.0 5.7 1.0
CE1 A:HIS96 3.0 7.5 1.0
CE1 A:HIS94 3.0 6.6 1.0
CG A:HIS119 3.1 5.7 1.0
O1 A:CO2302 3.3 9.4 1.0
CB A:HIS119 3.6 5.8 1.0
O A:HOH617 3.6 18.8 0.5
C A:CO2302 3.8 10.2 1.0
OG1 A:THR199 3.8 6.4 1.0
OE1 A:GLU106 4.0 6.2 1.0
NE2 A:HIS119 4.1 6.0 1.0
CG A:HIS94 4.1 6.0 1.0
ND1 A:HIS94 4.1 6.2 1.0
ND1 A:HIS96 4.1 7.9 1.0
CG A:HIS96 4.2 6.5 1.0
CD2 A:HIS119 4.2 5.7 1.0
O A:HOH454 4.4 19.6 1.0
O2 A:CO2302 4.4 12.7 1.0
O A:HOH701 4.5 20.8 1.0
O A:HOH709 4.9 19.6 1.0
CD A:GLU106 4.9 6.2 1.0

Reference:

C.U.Kim, J.K.Kim. Temperature Series of Human Carbonic Anhydrase II with Photolysis of Caged CO2 To Be Published.
Page generated: Thu Oct 31 13:26:56 2024

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