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Zinc in PDB 8uw9: Structure of AKT1(E17K) with Compound 4

Protein crystallography data

The structure of Structure of AKT1(E17K) with Compound 4, PDB code: 8uw9 was solved by G.B.Craven, J.Taunton, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 36.39 / 1.90
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 76.215, 87.209, 198.096, 90, 90, 90
R / Rfree (%) 20.5 / 24.5

Other elements in 8uw9:

The structure of Structure of AKT1(E17K) with Compound 4 also contains other interesting chemical elements:

Fluorine (F) 1 atom
Chlorine (Cl) 1 atom

Zinc Binding Sites:

The binding sites of Zinc atom in the Structure of AKT1(E17K) with Compound 4 (pdb code 8uw9). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Structure of AKT1(E17K) with Compound 4, PDB code: 8uw9:

Zinc binding site 1 out of 1 in 8uw9

Go back to Zinc Binding Sites List in 8uw9
Zinc binding site 1 out of 1 in the Structure of AKT1(E17K) with Compound 4


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Structure of AKT1(E17K) with Compound 4 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn509

b:47.7
occ:1.00
O1 A:XQ2501 2.1 43.0 1.0
NZ A:LYS17 2.1 62.1 1.0
SG A:CYS310 2.2 49.5 1.0
SG A:CYS296 2.3 42.0 1.0
CE A:LYS17 2.9 52.7 1.0
C7 A:XQ2501 3.0 47.2 1.0
C1 A:XQ2501 3.0 55.4 1.0
CB A:CYS310 3.1 59.1 1.0
CB A:CYS296 3.3 48.0 1.0
C2 A:XQ2501 3.4 55.1 1.0
CA A:CYS296 3.6 44.0 1.0
N A:LYS297 4.0 47.1 1.0
O A:HOH615 4.1 49.7 1.0
C6 A:XQ2501 4.1 47.9 1.0
CD A:LYS17 4.2 63.5 1.0
C A:CYS296 4.3 44.2 1.0
N A:GLU298 4.3 49.4 1.0
CB A:GLU298 4.4 55.9 1.0
F1 A:XQ2501 4.5 38.1 1.0
CA A:CYS310 4.5 71.0 1.0
C3 A:XQ2501 4.7 51.1 1.0
N A:CYS296 4.9 37.6 1.0
CA A:GLU298 5.0 56.4 1.0

Reference:

G.B.Craven, J.Taunton. Mutant-Selective AKT1 Inhibitors Via Lysine Targeting and Neo-Zinc Chelation To Be Published.
Page generated: Thu Oct 31 12:35:52 2024

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