Zinc in PDB 8u0t: Prd-0038 Rbd Bound to Rhinolophus Alcyone ACE2 (Local Refinement)

The binding sites of Zinc atom in the Prd-0038 Rbd Bound to Rhinolophus Alcyone ACE2 (Local Refinement) (pdb code 8u0t). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Prd-0038 Rbd Bound to Rhinolophus Alcyone ACE2 (Local Refinement), PDB code: 8u0t:

Zinc binding site 1 out of 1 in the Prd-0038 Rbd Bound to Rhinolophus Alcyone ACE2 (Local Refinement)


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Prd-0038 Rbd Bound to Rhinolophus Alcyone ACE2 (Local Refinement) within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn808 b:21.4 occ:1.00 OE1 A:GLU402 2.3 18.0 1.0 NE2 A:HIS374 2.7 19.9 1.0 CD A:GLU402 3.2 18.1 1.0 CE1 A:HIS374 3.2 19.7 1.0 NE2 A:HIS378 3.4 19.6 1.0 OE2 A:GLU402 3.5 17.3 1.0 CE1 A:HIS378 3.8 18.9 1.0 CD2 A:HIS374 3.8 21.3 1.0 CD2 A:HIS378 4.4 20.8 1.0 ND1 A:HIS374 4.4 20.1 1.0 CG A:GLU402 4.4 17.1 1.0 OE2 A:GLU406 4.5 18.0 1.0 CA A:GLU402 4.7 17.0 1.0 CG A:HIS374 4.7 21.3 1.0 ND1 A:HIS378 4.8 19.7 1.0 CB A:GLU402 4.8 16.4 1.0

J.Lee, S.K.Zepeda, Y.J.Park, A.L.Taylor, J.Quispe, C.Stewart, E.M.Leaf, C.Treichel, D.Corti, N.P.King, T.N.Starr, D.Veesler. Broad Receptor Tropism and Immunogenicity of A Clade 3 Sarbecovirus. Cell Host Microbe 2023.
ISSN: ESSN 1934-6069
PubMed: 37989312
DOI: 10.1016/J.CHOM.2023.10.018