Atomistry » Zinc » PDB 8spi-8t3y » 8t12
Atomistry »
  Zinc »
    PDB 8spi-8t3y »
      8t12 »

Zinc in PDB 8t12: Cryo-Em Structure of DENV2 NS5 in Complex with Human STAT2 with the N- Terminal Domain of STAT2 Ordered.

Zinc Binding Sites:

The binding sites of Zinc atom in the Cryo-Em Structure of DENV2 NS5 in Complex with Human STAT2 with the N- Terminal Domain of STAT2 Ordered. (pdb code 8t12). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Cryo-Em Structure of DENV2 NS5 in Complex with Human STAT2 with the N- Terminal Domain of STAT2 Ordered., PDB code: 8t12:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 8t12

Go back to Zinc Binding Sites List in 8t12
Zinc binding site 1 out of 2 in the Cryo-Em Structure of DENV2 NS5 in Complex with Human STAT2 with the N- Terminal Domain of STAT2 Ordered.


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Cryo-Em Structure of DENV2 NS5 in Complex with Human STAT2 with the N- Terminal Domain of STAT2 Ordered. within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Zn1001

b:157.7
occ:1.00
NE2 B:HIS714 2.0 89.8 1.0
NE2 B:HIS712 2.0 118.7 1.0
SG B:CYS728 2.3 111.8 1.0
SG B:CYS847 2.3 121.4 1.0
CD2 B:HIS712 2.9 118.1 1.0
CD2 B:HIS714 3.0 88.9 1.0
CE1 B:HIS714 3.1 88.4 1.0
CE1 B:HIS712 3.1 117.8 1.0
CB B:CYS728 3.4 106.6 1.0
CB B:CYS847 3.7 119.0 1.0
CG B:HIS712 4.1 117.3 1.0
ND1 B:HIS714 4.2 88.1 1.0
CG B:HIS714 4.2 88.8 1.0
ND1 B:HIS712 4.2 117.8 1.0
O B:ARG729 4.7 111.5 1.0
NH1 B:ARG769 4.8 90.3 1.0
CA B:CYS728 4.8 105.7 1.0
CD2 B:LEU839 4.9 101.6 1.0
CA B:CYS847 4.9 119.0 1.0
C B:CYS728 5.0 108.3 1.0
N B:ARG729 5.0 108.9 1.0

Zinc binding site 2 out of 2 in 8t12

Go back to Zinc Binding Sites List in 8t12
Zinc binding site 2 out of 2 in the Cryo-Em Structure of DENV2 NS5 in Complex with Human STAT2 with the N- Terminal Domain of STAT2 Ordered.


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Cryo-Em Structure of DENV2 NS5 in Complex with Human STAT2 with the N- Terminal Domain of STAT2 Ordered. within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Zn1002

b:182.9
occ:1.00
OE1 B:GLU438 2.1 115.9 1.0
NE2 B:HIS442 2.3 102.6 1.0
SG B:CYS450 2.6 115.6 1.0
CD B:GLU438 2.6 116.4 1.0
OE2 B:GLU438 2.7 117.7 1.0
CD2 B:HIS442 3.0 102.8 1.0
CE1 B:HIS442 3.1 101.1 1.0
CB B:CYS447 3.7 112.1 1.0
SG B:CYS447 3.9 112.1 1.0
CG B:GLU438 3.9 115.3 1.0
CA B:CYS447 3.9 112.8 1.0
N B:GLU448 4.0 132.2 1.0
CG B:HIS442 4.0 100.7 1.0
ND1 B:HIS442 4.0 99.9 1.0
CB B:CYS450 4.0 114.6 1.0
N B:THR449 4.3 106.4 1.0
C B:CYS447 4.5 113.7 1.0
CB B:GLU438 4.5 114.7 1.0
OG1 B:THR449 4.6 106.5 1.0
N B:CYS450 4.6 113.2 1.0
C B:THR449 4.7 105.3 1.0
O B:GLU438 4.8 113.8 1.0
CA B:CYS450 4.9 113.3 1.0
CD1 B:LEU484 4.9 92.6 1.0
O B:LYS446 5.0 114.2 1.0

Reference:

M.Biswal, J.Lu, J.Song. Cryo-Em Structure of DENV2 NS5 in Complex with Human STAT2 with the N-Terminal Domain of STAT2 Ordered. To Be Published.
Page generated: Thu Oct 31 11:25:14 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy