Zinc in PDB 8r23: INTS9-INTS11-BRAT1 Complex

The binding sites of Zinc atom in the INTS9-INTS11-BRAT1 Complex (pdb code 8r23). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the INTS9-INTS11-BRAT1 Complex, PDB code: 8r23:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the INTS9-INTS11-BRAT1 Complex


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of INTS9-INTS11-BRAT1 Complex within 5.0Å range: probe atom residue distance (Å) B Occ C:Zn800 b:46.4 occ:1.00 OD2 C:ASP178 2.0 44.8 1.0 ND1 C:HIS70 2.0 30.1 1.0 NE2 C:HIS68 2.3 28.9 1.0 NE2 C:HIS157 2.5 44.4 1.0 CE1 C:HIS70 2.7 30.1 1.0 CG C:ASP178 3.0 44.8 1.0 CD2 C:HIS68 3.1 28.9 1.0 SG A:CYS820 3.1 42.5 1.0 CG C:HIS70 3.2 30.1 1.0 CE1 C:HIS68 3.3 28.9 1.0 CE1 C:HIS157 3.4 44.4 1.0 CD2 C:HIS157 3.5 44.4 1.0 CB C:ASP178 3.5 44.8 1.0 CB A:CYS820 3.8 42.5 1.0 CB C:HIS70 3.9 30.1 1.0 NE2 C:HIS70 3.9 30.1 1.0 ZN C:ZN801 4.1 47.6 1.0 OD1 C:ASP178 4.2 44.8 1.0 CD2 C:HIS70 4.2 30.1 1.0 CG C:HIS68 4.2 28.9 1.0 NE2 C:HIS73 4.3 27.3 1.0 ND1 C:HIS68 4.3 28.9 1.0 CD2 C:HIS73 4.4 27.3 1.0 CE1 C:HIS392 4.5 56.0 1.0 ND1 C:HIS157 4.5 44.4 1.0 CG C:HIS157 4.6 44.4 1.0 CE1 C:HIS73 4.9 27.3 1.0 CA C:ASP178 5.0 44.8 1.0

Zinc binding site 2 out of 2 in the INTS9-INTS11-BRAT1 Complex


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of INTS9-INTS11-BRAT1 Complex within 5.0Å range: probe atom residue distance (Å) B Occ C:Zn801 b:47.6 occ:1.00 OD2 C:ASP72 2.0 29.3 1.0 NE2 C:HIS73 2.1 27.3 1.0 NE2 C:HIS414 2.1 44.0 1.0 SG A:CYS820 2.4 42.5 1.0 CD2 C:HIS73 2.7 27.3 1.0 CE1 C:HIS414 3.0 44.0 1.0 CG C:ASP72 3.0 29.3 1.0 CD2 C:HIS414 3.0 44.0 1.0 OD1 C:ASP72 3.3 29.3 1.0 OD2 C:ASP178 3.3 44.8 1.0 CE1 C:HIS73 3.3 27.3 1.0 CB A:CYS820 3.7 42.5 1.0 CG C:HIS73 4.0 27.3 1.0 ND1 C:HIS414 4.1 44.0 1.0 ZN C:ZN800 4.1 46.4 1.0 CG C:HIS414 4.1 44.0 1.0 OD1 C:ASP178 4.1 44.8 1.0 CG C:ASP178 4.1 44.8 1.0 CA A:CYS820 4.2 42.5 1.0 ND1 C:HIS73 4.2 27.3 1.0 CB C:ASP72 4.4 29.3 1.0 CG1 C:VAL15 4.6 47.0 1.0 NE2 C:HIS68 4.8 28.9 1.0 N A:CYS820 4.8 42.5 1.0

K.Sabath, C.Qiu, S.Jonas. Assembly Mechanism of Integrator'S Rna Cleavage Module. Mol.Cell 2024.
ISSN: ISSN 1097-2765
PubMed: 39032489
DOI: 10.1016/J.MOLCEL.2024.06.032