Zinc in PDB 8oko: Carbonic Anhydrase IX Like Mutant in Complex with STERIOD_SULPHAMOYL Inhibitor AKI_2

Enzymatic activity of Carbonic Anhydrase IX Like Mutant in Complex with STERIOD_SULPHAMOYL Inhibitor AKI_2

All present enzymatic activity of Carbonic Anhydrase IX Like Mutant in Complex with STERIOD_SULPHAMOYL Inhibitor AKI_2:
4.2.1.1;

Protein crystallography data

The structure of Carbonic Anhydrase IX Like Mutant in Complex with STERIOD_SULPHAMOYL Inhibitor AKI_2, PDB code: 8oko was solved by J.Brynda, P.M.Rezacova, E.Kudova, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 40.56 / 1.25
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 41.78, 41.14, 72.22, 90, 103.89, 90
R / Rfree (%) 13.9 / 17.3

Zinc Binding Sites:

The binding sites of Zinc atom in the Carbonic Anhydrase IX Like Mutant in Complex with STERIOD_SULPHAMOYL Inhibitor AKI_2 (pdb code 8oko). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Carbonic Anhydrase IX Like Mutant in Complex with STERIOD_SULPHAMOYL Inhibitor AKI_2, PDB code: 8oko:

Zinc binding site 1 out of 1 in 8oko

Go back to Zinc Binding Sites List in 8oko
Zinc binding site 1 out of 1 in the Carbonic Anhydrase IX Like Mutant in Complex with STERIOD_SULPHAMOYL Inhibitor AKI_2


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Carbonic Anhydrase IX Like Mutant in Complex with STERIOD_SULPHAMOYL Inhibitor AKI_2 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn301

b:10.7
occ:1.00
N19 A:VR3302 2.0 14.2 1.0
NE2 A:HIS94 2.0 10.3 1.0
ND1 A:HIS119 2.0 10.6 1.0
NE2 A:HIS96 2.0 10.1 1.0
CE1 A:HIS119 2.9 11.0 1.0
CD2 A:HIS94 3.0 10.3 1.0
CD2 A:HIS96 3.0 10.1 1.0
CE1 A:HIS96 3.0 11.2 1.0
CE1 A:HIS94 3.0 10.7 1.0
S22 A:VR3302 3.1 16.0 1.0
CG A:HIS119 3.1 10.0 1.0
O20 A:VR3302 3.3 16.3 1.0
O25 A:VR3302 3.5 16.3 1.0
CB A:HIS119 3.6 8.6 1.0
O A:HOH584 3.8 28.3 1.0
OE1 A:GLU106 3.9 11.5 1.0
OG1 A:THR198 3.9 10.6 1.0
NE2 A:HIS119 4.1 11.2 1.0
ND1 A:HIS94 4.2 11.3 1.0
CG A:HIS94 4.2 10.2 1.0
ND1 A:HIS96 4.2 10.8 1.0
CG A:HIS96 4.2 10.4 1.0
CD2 A:HIS119 4.2 10.7 1.0
O21 A:VR3302 4.3 14.9 1.0
CD A:GLU106 4.8 11.3 1.0

Reference:

J.Brynda, P.M.Rezacova, E.Kudova. Carbonic Anhydrase II in Complex with STERIOD_SULPHAMOYL To Be Published.
Page generated: Thu Oct 31 08:50:47 2024

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