Zinc in PDB 8git: Structure of Ternary Complex of Mouse Cgas with Dsdna and Bound Atp: with 10MM MG2+ and 1MM MN2+

Enzymatic activity of Structure of Ternary Complex of Mouse Cgas with Dsdna and Bound Atp: with 10MM MG2+ and 1MM MN2+

All present enzymatic activity of Structure of Ternary Complex of Mouse Cgas with Dsdna and Bound Atp: with 10MM MG2+ and 1MM MN2+:
2.7.7.86;

Protein crystallography data

The structure of Structure of Ternary Complex of Mouse Cgas with Dsdna and Bound Atp: with 10MM MG2+ and 1MM MN2+, PDB code: 8git was solved by S.Wu, J.Sohn, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.77 / 2.72
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 77.6, 98.209, 142.528, 90, 90, 90
R / Rfree (%) 18.5 / 23

Other elements in 8git:

The structure of Structure of Ternary Complex of Mouse Cgas with Dsdna and Bound Atp: with 10MM MG2+ and 1MM MN2+ also contains other interesting chemical elements:

Manganese (Mn) 4 atoms

Zinc Binding Sites:

The binding sites of Zinc atom in the Structure of Ternary Complex of Mouse Cgas with Dsdna and Bound Atp: with 10MM MG2+ and 1MM MN2+ (pdb code 8git). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Structure of Ternary Complex of Mouse Cgas with Dsdna and Bound Atp: with 10MM MG2+ and 1MM MN2+, PDB code: 8git:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 8git

Go back to Zinc Binding Sites List in 8git
Zinc binding site 1 out of 2 in the Structure of Ternary Complex of Mouse Cgas with Dsdna and Bound Atp: with 10MM MG2+ and 1MM MN2+


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Structure of Ternary Complex of Mouse Cgas with Dsdna and Bound Atp: with 10MM MG2+ and 1MM MN2+ within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn602

b:41.3
occ:1.00
NE2 A:HIS378 2.1 42.5 1.0
SG A:CYS385 2.3 45.0 1.0
SG A:CYS384 2.3 45.2 1.0
SG A:CYS392 2.3 46.1 1.0
CD2 A:HIS378 2.9 40.2 1.0
CE1 A:HIS378 3.2 38.6 1.0
CB A:CYS392 3.2 41.9 1.0
CB A:CYS385 3.4 41.9 1.0
N A:CYS392 3.6 39.9 1.0
CB A:CYS384 3.7 39.1 1.0
N A:CYS385 3.7 41.4 1.0
C A:CYS384 3.8 40.6 1.0
CA A:CYS392 3.9 41.1 1.0
CA A:CYS385 4.1 41.1 1.0
CG A:HIS378 4.1 41.9 1.0
ND1 A:HIS378 4.2 39.1 1.0
O A:CYS384 4.2 42.5 1.0
CA A:CYS384 4.3 40.3 1.0
NH1 A:ARG394 4.4 40.7 1.0
C A:CYS392 4.5 45.5 1.0
O A:CYS392 4.7 47.1 1.0
C A:LYS391 4.7 45.2 1.0
O A:ALA390 4.8 45.5 1.0

Zinc binding site 2 out of 2 in 8git

Go back to Zinc Binding Sites List in 8git
Zinc binding site 2 out of 2 in the Structure of Ternary Complex of Mouse Cgas with Dsdna and Bound Atp: with 10MM MG2+ and 1MM MN2+


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Structure of Ternary Complex of Mouse Cgas with Dsdna and Bound Atp: with 10MM MG2+ and 1MM MN2+ within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Zn602

b:39.8
occ:1.00
NE2 C:HIS378 2.1 45.1 1.0
SG C:CYS385 2.3 47.4 1.0
SG C:CYS392 2.3 43.6 1.0
SG C:CYS384 2.3 42.2 1.0
CD2 C:HIS378 3.0 39.8 1.0
CE1 C:HIS378 3.1 37.7 1.0
CB C:CYS385 3.2 43.0 1.0
CB C:CYS392 3.3 45.0 1.0
O C:HOH714 3.5 42.4 1.0
N C:CYS392 3.7 41.9 1.0
CB C:CYS384 3.7 42.0 1.0
N C:CYS385 3.7 42.5 1.0
C C:CYS384 3.9 43.4 1.0
CA C:CYS392 4.0 45.6 1.0
CA C:CYS385 4.0 44.1 1.0
CG C:HIS378 4.2 42.0 1.0
ND1 C:HIS378 4.2 40.2 1.0
O C:CYS384 4.2 44.3 1.0
NH1 C:ARG394 4.3 44.0 1.0
CA C:CYS384 4.3 42.8 1.0
O C:CYS392 4.5 50.1 1.0
C C:CYS392 4.5 45.6 1.0
C C:LYS391 4.7 45.1 1.0
O C:ALA390 4.8 47.8 1.0

Reference:

S.Wu, J.Sohn. Structure of Ternary Complex of Mouse Cgas with Dsdna and Bound Atp: with 10MM MG2+ and 1MM MN2+ To Be Published.
Page generated: Wed Oct 30 20:54:09 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy