Zinc in PDB 7wsg: Cryo-Em Structure of Sars-Cov Spike Receptor-Binding Domain in Complex with Sea Lion ACE2

The binding sites of Zinc atom in the Cryo-Em Structure of Sars-Cov Spike Receptor-Binding Domain in Complex with Sea Lion ACE2 (pdb code 7wsg). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Cryo-Em Structure of Sars-Cov Spike Receptor-Binding Domain in Complex with Sea Lion ACE2, PDB code: 7wsg:

Zinc binding site 1 out of 1 in the Cryo-Em Structure of Sars-Cov Spike Receptor-Binding Domain in Complex with Sea Lion ACE2


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Cryo-Em Structure of Sars-Cov Spike Receptor-Binding Domain in Complex with Sea Lion ACE2 within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn901 b:30.0 occ:1.00 OE2 A:GLU402 2.1 66.7 1.0 NE2 A:HIS378 2.3 49.2 1.0 NE2 A:HIS374 2.3 51.0 1.0 CD2 A:HIS378 3.1 47.4 1.0 CD2 A:HIS374 3.1 50.9 1.0 CD A:GLU402 3.2 67.5 1.0 CE1 A:HIS378 3.4 41.7 1.0 CE1 A:HIS374 3.4 49.5 1.0 OE1 A:GLU402 3.9 66.9 1.0 OE2 A:GLU375 4.1 53.8 1.0 OE1 A:GLU375 4.2 55.6 1.0 CG A:HIS378 4.3 38.0 1.0 CG A:GLU402 4.3 58.4 1.0 CG A:HIS374 4.3 42.4 1.0 ND1 A:HIS378 4.4 35.7 1.0 ND1 A:HIS374 4.4 47.6 1.0 CD A:GLU375 4.5 53.2 1.0

S.Li, R.Yang, D.Zhang, P.Han, Z.Xu, Q.Chen, R.Zhao, X.Zhao, X.Qu, A.Zheng, L.Wang, L.Li, Y.Hu, R.Zhang, C.Su, S.Niu, Y.Zhang, J.Qi, K.Liu, Q.Wang, G.F.Gao. Cross-Species Recognition and Molecular Basis of Sars-Cov-2 and Sars-Cov Binding to ACE2S of Marine Animals. Natl Sci Rev V. 9 AC122 2022.
ISSN: ESSN 2053-714X
PubMed: 36187898
DOI: 10.1093/NSR/NWAC122