Zinc in PDB 7wse: Cryo-Em Structure of Sars-Cov-2 Spike Receptor-Binding Domain Complexed with Its Receptor Minke Whale ACE2

Zinc Binding Sites:

The binding sites of Zinc atom in the Cryo-Em Structure of Sars-Cov-2 Spike Receptor-Binding Domain Complexed with Its Receptor Minke Whale ACE2 (pdb code 7wse). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Cryo-Em Structure of Sars-Cov-2 Spike Receptor-Binding Domain Complexed with Its Receptor Minke Whale ACE2, PDB code: 7wse:

Zinc binding site 1 out of 1 in 7wse

Go back to Zinc Binding Sites List in 7wse
Zinc binding site 1 out of 1 in the Cryo-Em Structure of Sars-Cov-2 Spike Receptor-Binding Domain Complexed with Its Receptor Minke Whale ACE2


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Cryo-Em Structure of Sars-Cov-2 Spike Receptor-Binding Domain Complexed with Its Receptor Minke Whale ACE2 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn801

b:30.0
occ:1.00
OE1 A:GLU401 2.3 66.9 1.0
NE2 A:HIS373 2.3 30.0 1.0
NE2 A:HIS377 2.3 30.0 1.0
OE2 A:GLU401 2.4 66.7 1.0
CD A:GLU401 2.6 67.5 1.0
CE1 A:HIS373 3.0 30.0 1.0
CE1 A:HIS377 3.0 30.0 1.0
CD2 A:HIS377 3.2 30.0 1.0
CD2 A:HIS373 3.4 30.0 1.0
ND1 A:HIS377 4.0 30.0 1.0
CG A:GLU401 4.0 58.4 1.0
CG A:HIS377 4.1 30.0 1.0
ND1 A:HIS373 4.1 30.0 1.0
OE2 A:GLU374 4.2 53.8 1.0
CG A:HIS373 4.4 30.0 1.0
CB A:GLU401 4.7 46.1 1.0
CA A:GLU401 4.7 57.4 1.0
CD A:GLU374 4.9 53.2 1.0

Reference:

S.Li, R.Yang, D.Zhang, P.Han, Z.Xu, Q.Chen, R.Zhao, X.Zhao, X.Qu, A.Zheng, L.Wang, L.Li, Y.Hu, R.Zhang, C.Su, S.Niu, Y.Zhang, J.Qi, K.Liu, Q.Wang, G.F.Gao. Cross-Species Recognition and Molecular Basis of Sars-Cov-2 and Sars-Cov Binding to ACE2S of Marine Animals. Natl Sci Rev V. 9 AC122 2022.
ISSN: ESSN 2053-714X
PubMed: 36187898
DOI: 10.1093/NSR/NWAC122
Page generated: Sat Apr 8 05:20:51 2023

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