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Zinc in PDB 6omk: Crystal Structure of A Glycylpeptide N-Tetradecanoyltransferase (N- Myristoyl Transferase, Nmt) From Leishmania Major Friedlin Bound to Tetradecanoyl-Coa

Enzymatic activity of Crystal Structure of A Glycylpeptide N-Tetradecanoyltransferase (N- Myristoyl Transferase, Nmt) From Leishmania Major Friedlin Bound to Tetradecanoyl-Coa

All present enzymatic activity of Crystal Structure of A Glycylpeptide N-Tetradecanoyltransferase (N- Myristoyl Transferase, Nmt) From Leishmania Major Friedlin Bound to Tetradecanoyl-Coa:
2.3.1.97;

Protein crystallography data

The structure of Crystal Structure of A Glycylpeptide N-Tetradecanoyltransferase (N- Myristoyl Transferase, Nmt) From Leishmania Major Friedlin Bound to Tetradecanoyl-Coa, PDB code: 6omk was solved by Seattle Structural Genomics Center For Infectious Disease (Ssgcid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 44.59 / 2.10
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 49.250, 89.170, 90.360, 90.00, 90.00, 90.00
R / Rfree (%) 17 / 23.3

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of A Glycylpeptide N-Tetradecanoyltransferase (N- Myristoyl Transferase, Nmt) From Leishmania Major Friedlin Bound to Tetradecanoyl-Coa (pdb code 6omk). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of A Glycylpeptide N-Tetradecanoyltransferase (N- Myristoyl Transferase, Nmt) From Leishmania Major Friedlin Bound to Tetradecanoyl-Coa, PDB code: 6omk:

Zinc binding site 1 out of 1 in 6omk

Go back to Zinc Binding Sites List in 6omk
Zinc binding site 1 out of 1 in the Crystal Structure of A Glycylpeptide N-Tetradecanoyltransferase (N- Myristoyl Transferase, Nmt) From Leishmania Major Friedlin Bound to Tetradecanoyl-Coa


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of A Glycylpeptide N-Tetradecanoyltransferase (N- Myristoyl Transferase, Nmt) From Leishmania Major Friedlin Bound to Tetradecanoyl-Coa within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn502

b:26.7
occ:1.00
 NE2 A:HIS1 2.1 41.7 1.0
ND1 A:HIS3 2.2 35.7 1.0
CE1 A:HIS1 2.9 34.5 1.0
CG A:HIS3 3.1 41.9 1.0
CE1 A:HIS3 3.2 35.4 1.0
CD2 A:HIS1 3.3 38.4 1.0
CB A:HIS3 3.4 41.3 1.0
ND1 A:HIS1 4.1 35.9 1.0
NE2 A:HIS3 4.3 37.7 1.0
CD2 A:HIS3 4.3 37.3 1.0
CG A:HIS1 4.3 41.0 1.0
O A:HIS2 4.3 41.0 1.0
CA A:HIS3 4.4 46.3 1.0
C A:HIS2 5.0 35.1 1.0

Reference:

T.E.Edwards, P.S.Horanyi, B.A.Bertolin, D.D.Lorimer, Seattle Structural Genomics Center For Infectious Disease(Ssgcid). Crystal Structure of A Glycylpeptide N-Tetradecanoyltransferase (N-Myristoyl Transferase, Nmt) From Leishmania Major Friedlin Bound to Tetradecanoyl-Coa To Be Published.
Page generated: Tue Oct 29 04:29:16 2024

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