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Zinc in PDB 6j07: Crystal Structure of Human TERB2 and TERB1

Protein crystallography data

The structure of Crystal Structure of Human TERB2 and TERB1, PDB code: 6j07 was solved by Y.Wang, Y.Chen, J.Wu, C.Huang, M.Lei, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 46.96 / 3.30
Space group P 64 2 2
Cell size a, b, c (Å), α, β, γ (°) 126.900, 126.900, 90.429, 90.00, 90.00, 120.00
R / Rfree (%) 28.9 / 33.7

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of Human TERB2 and TERB1 (pdb code 6j07). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of Human TERB2 and TERB1, PDB code: 6j07:

Zinc binding site 1 out of 1 in 6j07

Go back to Zinc Binding Sites List in 6j07
Zinc binding site 1 out of 1 in the Crystal Structure of Human TERB2 and TERB1


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of Human TERB2 and TERB1 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Zn800

b:0.8
occ:1.00
SG B:CYS618 2.2 37.7 1.0
HG B:CYS618 2.4 43.0 1.0
SG B:CYS592 2.5 0.8 1.0
ND1 B:HIS621 2.6 35.2 1.0
SG B:CYS595 2.7 55.1 1.0
H B:CYS618 2.8 70.3 1.0
HB3 B:CYS618 3.0 0.1 1.0
HG B:CYS592 3.1 0.9 1.0
CB B:CYS618 3.2 93.7 1.0
O B:SER593 3.2 0.4 1.0
CE1 B:HIS621 3.3 54.7 1.0
HB2 B:HIS621 3.4 60.2 1.0
HE1 B:HIS621 3.4 67.2 1.0
HG B:CYS595 3.4 67.7 1.0
H B:CYS595 3.5 0.3 1.0
CG B:HIS621 3.6 74.4 1.0
N B:CYS618 3.6 57.3 1.0
HB2 B:CYS595 3.9 82.7 1.0
HB3 B:CYS592 3.9 0.9 1.0
CB B:CYS595 3.9 67.6 1.0
CB B:CYS592 3.9 0.1 1.0
CB B:HIS621 4.0 48.9 1.0
HB2 B:CYS618 4.0 0.1 1.0
N B:CYS595 4.0 0.1 1.0
CA B:CYS618 4.0 54.5 1.0
O B:CYS592 4.2 0.6 1.0
HA B:GLN617 4.3 48.4 1.0
C B:SER593 4.3 75.5 1.0
HA3 B:GLY594 4.3 0.4 1.0
H B:HIS621 4.4 89.8 1.0
C B:CYS592 4.4 88.5 1.0
NE2 B:HIS621 4.5 74.0 1.0
HB3 B:HIS621 4.5 60.2 1.0
HB2 B:CYS592 4.6 0.9 1.0
CA B:CYS595 4.6 83.3 1.0
CD2 B:HIS621 4.6 71.9 1.0
C B:GLY594 4.6 0.1 1.0
HB3 B:CYS595 4.7 82.7 1.0
C B:GLN617 4.8 37.6 1.0
HA B:CYS618 4.8 67.0 1.0
CA B:CYS592 4.8 96.3 1.0
HD21 B:LEU611 4.8 95.7 1.0
C B:CYS618 4.8 56.6 1.0
CA B:GLY594 4.9 94.8 1.0
O B:CYS618 4.9 0.2 1.0
HA B:CYS595 4.9 0.6 1.0
N B:SER593 5.0 76.3 1.0
HD22 B:LEU611 5.0 95.7 1.0
CA B:GLN617 5.0 39.0 1.0

Reference:

Y.Wang, Y.Chen, J.Chen, L.Wang, L.Nie, J.Long, H.Chang, J.Wu, C.Huang, M.Lei. The Meiotic TERB1-TERB2-Majin Complex Tethers Telomeres to the Nuclear Envelope. Nat Commun V. 10 564 2019.
ISSN: ESSN 2041-1723
PubMed: 30718482
DOI: 10.1038/S41467-019-08437-1
Page generated: Tue Oct 29 00:41:10 2024

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