Atomistry » Zinc » PDB 6rpn-6rwn » 6rui
Atomistry »
  Zinc »
    PDB 6rpn-6rwn »
      6rui »

Zinc in PDB 6rui: Rna Polymerase I Pre-Initiation Complex Dna Opening Intermediate 2

Enzymatic activity of Rna Polymerase I Pre-Initiation Complex Dna Opening Intermediate 2

All present enzymatic activity of Rna Polymerase I Pre-Initiation Complex Dna Opening Intermediate 2:
2.7.7.6;

Zinc Binding Sites:

The binding sites of Zinc atom in the Rna Polymerase I Pre-Initiation Complex Dna Opening Intermediate 2 (pdb code 6rui). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Rna Polymerase I Pre-Initiation Complex Dna Opening Intermediate 2, PDB code: 6rui:

Zinc binding site 1 out of 1 in 6rui

Go back to Zinc Binding Sites List in 6rui
Zinc binding site 1 out of 1 in the Rna Polymerase I Pre-Initiation Complex Dna Opening Intermediate 2


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Rna Polymerase I Pre-Initiation Complex Dna Opening Intermediate 2 within 5.0Å range:
probe atom residue distance (Å) B Occ
Q:Zn601

b:0.0
occ:1.00
OG1 Q:THR12 2.1 0.4 1.0
CD2 Q:HIS33 2.4 84.3 1.0
SG Q:CYS29 2.5 96.3 1.0
CB Q:THR12 2.6 0.4 1.0
CG Q:HIS33 3.3 84.3 1.0
O Q:THR12 3.3 0.4 1.0
CB Q:CYS29 3.3 96.3 1.0
CG2 Q:THR12 3.5 0.4 1.0
NE2 Q:HIS33 3.5 84.3 1.0
CB Q:HIS33 3.6 84.3 1.0
CA Q:THR12 3.8 0.4 1.0
C Q:THR12 4.0 0.4 1.0
CB Q:TYR31 4.3 95.7 1.0
ND1 Q:HIS33 4.5 84.3 1.0
N Q:HIS33 4.5 84.3 1.0
CE1 Q:HIS33 4.6 84.3 1.0
N Q:TYR31 4.6 95.7 1.0
CA Q:HIS33 4.6 84.3 1.0
O Q:GLY11 4.7 0.9 1.0
CA Q:CYS29 4.8 96.3 1.0
CA Q:TYR31 4.9 95.7 1.0
N Q:THR12 4.9 0.4 1.0
CD2 Q:TYR31 4.9 95.7 1.0
CG Q:TYR31 5.0 95.7 1.0

Reference:

Y.Sadian, F.Baudin, L.Tafur, B.Murciano, R.Wetzel, F.Weis, C.W.Muller. Molecular Insight Into Rna Polymerase I Promoter Recognition and Promoter Melting. Nat Commun V. 10 5543 2019.
ISSN: ESSN 2041-1723
PubMed: 31804486
DOI: 10.1038/S41467-019-13510-W
Page generated: Tue Oct 29 06:46:50 2024

Last articles

Mg in 6LRM
Mg in 6LRB
Mg in 6LQK
Mg in 6LQ9
Mg in 6LPI
Mg in 6LPS
Mg in 6LL8
Mg in 6LNR
Mg in 6LN9
Mg in 6LN8
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy