Zinc in PDB 6h87: Mamm Ctd D249N - Zinc Form

The structure of Mamm Ctd D249N - Zinc Form, PDB code: 6h87 was solved by S.Barber-Zucker, R.Zarivach, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	46.02 / 1.50
Space group	P 31 2 1
Cell size a, b, c (Å), α, β, γ (°)	53.137, 53.137, 64.465, 90.00, 90.00, 120.00
R / Rfree (%)	18.9 / 22.7

The binding sites of Zinc atom in the Mamm Ctd D249N - Zinc Form (pdb code 6h87). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 3 binding sites of Zinc where determined in the Mamm Ctd D249N - Zinc Form, PDB code: 6h87:
Jump to Zinc binding site number: 1; 2; 3;

Zinc binding site 1 out of 3 in the Mamm Ctd D249N - Zinc Form


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Mamm Ctd D249N - Zinc Form within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn401 b:15.1 occ:1.00 OE1 A:GLU289 1.9 13.9 1.0 NE2 A:HIS236 2.1 15.1 1.0 CD A:GLU289 2.7 18.1 1.0 OE2 A:GLU289 2.9 19.4 1.0 CD2 A:HIS236 3.0 12.7 1.0 CE1 A:HIS236 3.1 16.6 1.0 O A:HOH557 4.1 33.8 1.0 CG A:GLU289 4.1 14.9 1.0 CG A:HIS236 4.2 13.2 1.0 ND1 A:HIS236 4.2 15.9 1.0 CG2 A:ILE235 4.4 15.1 1.0 CD1 A:ILE251 4.9 16.1 1.0 CB A:GLU289 4.9 13.9 1.0

Zinc binding site 2 out of 3 in the Mamm Ctd D249N - Zinc Form


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Mamm Ctd D249N - Zinc Form within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn402 b:28.4 occ:1.00 NE2 A:HIS264 2.0 17.9 1.0 OE2 A:GLU268 2.1 28.5 1.0 CD2 A:HIS264 2.9 25.0 1.0 CE1 A:HIS264 3.0 21.7 1.0 CD A:GLU268 3.0 34.9 1.0 CG A:GLU268 3.3 19.5 1.0 CG A:HIS264 4.1 18.1 1.0 ND1 A:HIS264 4.1 19.9 1.0 OE1 A:GLU268 4.2 37.5 1.0 CB A:GLU268 4.8 15.9 1.0

Zinc binding site 3 out of 3 in the Mamm Ctd D249N - Zinc Form


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 3 of Mamm Ctd D249N - Zinc Form within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn403 b:19.9 occ:1.00 ND1 A:HIS264 2.1 19.9 1.0 O A:HOH565 2.2 18.7 1.0 SG A:CYS267 2.5 19.8 1.0 CE1 A:HIS264 3.1 21.7 1.0 CB A:CYS267 3.1 11.3 1.0 CG A:HIS264 3.2 18.1 1.0 CA A:HIS264 3.4 13.2 1.0 CB A:HIS264 3.5 12.0 1.0 O A:HOH542 3.9 22.7 1.0 O A:VAL286 3.9 14.7 1.0 CA A:SER287 4.2 12.2 1.0 N A:HIS264 4.2 16.0 1.0 NE2 A:HIS264 4.2 17.9 1.0 CD2 A:HIS264 4.3 25.0 1.0 O A:HIS264 4.3 15.5 1.0 C A:HIS264 4.3 15.6 1.0 CB A:SER287 4.5 14.2 1.0 CA A:CYS267 4.6 13.5 1.0 O A:ALA263 4.6 16.8 1.0 C A:ALA263 4.7 17.2 1.0 C A:VAL286 4.8 13.9 1.0 N A:ALA288 4.9 12.8 1.0 N A:CYS267 5.0 13.8 1.0 N A:SER287 5.0 13.5 1.0 C A:SER287 5.0 13.9 1.0

S.Barber-Zucker, R.Zarivach. Mamm Ctd D249N - Zinc Form To Be Published.