Zinc in PDB 6rnm: Crystal Structure of A Complex Between the Llfpg Protein, A Thf-Dna and An Inhibitor

All present enzymatic activity of Crystal Structure of A Complex Between the Llfpg Protein, A Thf-Dna and An Inhibitor:
3.2.2.23; 4.2.99.18;

The structure of Crystal Structure of A Complex Between the Llfpg Protein, A Thf-Dna and An Inhibitor, PDB code: 6rnm was solved by F.Coste, S.Goffinont, B.Castaing, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	59.13 / 1.76
Space group	P 41 21 2
Cell size a, b, c (Å), α, β, γ (°)	91.957, 91.957, 142.182, 90.00, 90.00, 90.00
R / Rfree (%)	16.9 / 18.8

The binding sites of Zinc atom in the Crystal Structure of A Complex Between the Llfpg Protein, A Thf-Dna and An Inhibitor (pdb code 6rnm). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of A Complex Between the Llfpg Protein, A Thf-Dna and An Inhibitor, PDB code: 6rnm:

Zinc binding site 1 out of 1 in the Crystal Structure of A Complex Between the Llfpg Protein, A Thf-Dna and An Inhibitor


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of A Complex Between the Llfpg Protein, A Thf-Dna and An Inhibitor within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn301 b:38.6 occ:1.00 SG A:CYS265 2.2 35.7 1.0 SG A:CYS268 2.3 39.0 1.0 SG A:CYS248 2.3 42.2 1.0 SG A:CYS245 2.4 38.2 1.0 CB A:CYS245 3.1 36.6 1.0 CB A:CYS268 3.3 33.5 1.0 CB A:CYS265 3.4 30.6 1.0 CB A:CYS248 3.4 40.8 1.0 N A:CYS248 3.8 44.1 1.0 N A:CYS268 3.8 33.5 1.0 CA A:CYS248 4.2 42.9 1.0 CA A:CYS268 4.2 33.0 1.0 CB A:VAL267 4.4 37.3 1.0 NE1 A:TRP179 4.5 32.5 1.0 CB A:ARG247 4.5 41.8 1.0 CA A:CYS245 4.6 37.2 1.0 CA A:CYS265 4.8 30.6 1.0 N A:GLY249 4.8 44.1 1.0 C A:ARG247 4.8 49.5 1.0 CG1 A:VAL267 4.8 37.5 1.0 C A:VAL267 4.8 36.0 1.0 C A:CYS248 4.9 48.3 1.0 NE A:ARG247 4.9 45.0 1.0 CB A:ALA250 4.9 40.5 1.0 N A:ALA250 5.0 42.5 1.0 NH2 A:ARG247 5.0 33.6 1.0

C.Rieux, S.Goffinont, F.Coste, Z.Tber, J.Cros, V.Roy, M.Guerin, V.Gaudon, S.Bourg, A.Biela, V.Aucagne, L.Agrofoglio, N.Garnier, B.Castaing. Thiopurine Derivative-Induced Fpg/Nei Dna Glycosylase Inhibition: Structural, Dynamic and Functional Insights. Int J Mol Sci V. 21 2020.
ISSN: ESSN 1422-0067
PubMed: 32192183
DOI: 10.3390/IJMS21062058