Zinc in PDB 6h56: Effector Domain of Pseudomonas Aeruginosa VGRG2B

The structure of Effector Domain of Pseudomonas Aeruginosa VGRG2B, PDB code: 6h56 was solved by A.Forster, P.S.Freemont, A.Filloux, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	43.93 / 3.20
Space group	P 31
Cell size a, b, c (Å), α, β, γ (°)	78.310, 78.310, 115.344, 90.00, 90.00, 120.00
R / Rfree (%)	22.3 / 23.2

The binding sites of Zinc atom in the Effector Domain of Pseudomonas Aeruginosa VGRG2B (pdb code 6h56). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Effector Domain of Pseudomonas Aeruginosa VGRG2B, PDB code: 6h56:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the Effector Domain of Pseudomonas Aeruginosa VGRG2B


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Effector Domain of Pseudomonas Aeruginosa VGRG2B within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn1100 b:1.0 occ:1.00 OE1 A:GLU983 2.9 0.8 1.0 NE2 A:HIS939 3.1 84.4 1.0 OE2 A:GLU983 3.2 1.0 1.0 NE2 A:HIS935 3.3 83.5 1.0 OE2 A:GLU936 3.3 0.3 1.0 CD A:GLU983 3.4 0.2 1.0 CD2 A:HIS935 3.5 83.3 1.0 OE1 A:GLU936 3.6 0.3 1.0 CD2 A:HIS939 3.6 84.6 1.0 CD A:GLU936 3.8 0.7 1.0 CE1 A:HIS939 4.2 84.4 1.0 O A:VAL903 4.3 88.1 1.0 CE1 A:HIS935 4.5 84.2 1.0 CG A:HIS935 4.8 82.4 1.0 CG A:HIS939 4.9 83.5 1.0 CG A:GLU983 5.0 94.6 1.0

Zinc binding site 2 out of 2 in the Effector Domain of Pseudomonas Aeruginosa VGRG2B


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Effector Domain of Pseudomonas Aeruginosa VGRG2B within 5.0Å range: probe atom residue distance (Å) B Occ B:Zn1100 b:0.6 occ:1.00 OE2 B:GLU983 3.0 0.7 1.0 NE2 B:HIS935 3.3 1.0 1.0 NE2 B:HIS939 3.4 90.4 1.0 OE1 B:GLU936 3.5 0.4 1.0 CD2 B:HIS935 3.6 0.2 1.0 OE2 B:GLU936 3.7 0.3 1.0 CD2 B:HIS939 3.9 91.0 1.0 CD B:GLU936 4.0 0.4 1.0 O B:VAL903 4.0 97.8 1.0 CD B:GLU983 4.2 0.7 1.0 CE1 B:HIS935 4.5 0.2 1.0 CE1 B:HIS939 4.6 90.6 1.0 CG B:GLU983 4.9 99.9 1.0 CG B:HIS935 4.9 99.8 1.0

T.E.Wood, A.Forster, E.Manoli, S.Howard, A.Hachani, A.D.Hayward, P.S.Freemont, A.Filloux. Effector Domain of Pseudomonas Aeruginosa VGRG2B To Be Published.